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. 2020 Aug 14;37(17):1870–1879. doi: 10.1089/neu.2019.6962

Table 3C.

Predicted Deleteriousness by Several in Silico Tools for the Variants Found in Ubiquitin Genes

Case ID Gene Trancript Variant/AA change SIFT PolyPhen PredictSNP2 Mutation Taster Mutation Assessor (FI score)
R120 TRIM2 NM_015271.3 c.158G>C/p.Cys53Ser D Probably damaging 87% D D/AA/Protein/SS High (4.6)
R240 HECTD1 NM_015382.3 c.5000G>A/p.Arg1667His D Probably damaging 87% D D/AA/Protein/SS Low (1.83)
R110, R111 SQSTM1 NM_003900.4 c.1210A>G/p.Met404Val D Possibly damaging 87% D D/AA/Protein/SS Medium (2.98)

AA, amino acid; FI, functional impact.