Table 1.
The p-distances of S1 coding region1 between our IBV isolates and the vaccine strains.
| Strain | LJL/130906 |
LJL/140820 |
I1124/16 |
I0306/17 |
||||
|---|---|---|---|---|---|---|---|---|
| NT2 | AA2 | NT | AA | NT | AA | NT | AA | |
| H120 (M21970-Netherlands) | 0.020 | 0.024 | 0.002 | 0.004 | 0.020 | 0.024 | 0.001 | 0.000 |
| H120 (MK071267-Brazil) | 0.021 | 0.026 | 0.002 | 0.006 | 0.021 | 0.026 | 0.002 | 0.002 |
| H120 commercial vaccine D (KU736751-Brazil) | 0.003 | 0.007 | 0.018 | 0.020 | 0.002 | 0.004 | 0.020 | 0.020 |
| H120 (EU822341-China-Taiwan) | 0.019 | 0.022 | 0.002 | 0.006 | 0.019 | 0.022 | 0.002 | 0.002 |
| H120 (FJ807652-China) | 0.020 | 0.026 | 0.003 | 0.009 | 0.020 | 0.026 | 0.004 | 0.006 |
| H120 (MK937831-China) | 0.020 | 0.024 | 0.001 | 0.004 | 0.020 | 0.024 | 0.003 | 0.004 |
| H120 (FJ888351-China) | 0.020 | 0.024 | 0.001 | 0.004 | 0.020 | 0.024 | 0.003 | 0.004 |
| H120 (KF188436-India) | 0.019 | 0.022 | 0.001 | 0.002 | 0.019 | 0.022 | 0.002 | 0.002 |
| H120 (GU393335-USA) | 0.020 | 0.022 | 0.001 | 0.002 | 0.020 | 0.022 | 0.002 | 0.002 |
| H120 (KR605489-Iran) | 0.021 | 0.024 | 0.002 | 0.004 | 0.021 | 0.024 | 0.001 | 0.000 |
| W93 (AY842862-China | 0.022 | 0.028 | 0.003 | 0.007 | 0.022 | 0.028 | 0.005 | 0.007 |
| D41 (AH014596-China) | 0.022 | 0.030 | 0.004 | 0.009 | 0.022 | 0.030 | 0.006 | 0.009 |
| HK (AY761141-China) | 0.020 | 0.024 | 0.002 | 0.007 | 0.020 | 0.024 | 0.004 | 0.007 |
| H94 (DQ515801-China) | 0.022 | 0.028 | 0.003 | 0.007 | 0.022 | 0.028 | 0.005 | 0.007 |
| IBN (AY856348-China) | 0.021 | 0.026 | 0.002 | 0.006 | 0.021 | 0.026 | 0.004 | 0.006 |
| Ma5 (KY626045-Brazil) | 0.019 | 0.024 | 0.001 | 0.000 | 0.019 | 0.024 | 0.004 | 0.004 |
| Mass commercial vaccine (EU359657-USA) | 0.001 | 0.002 | 0.020 | 0.023 | 0.001 | 0.002 | 0.021 | 0.023 |
| H52 (EU817497-China) | 0.019 | 0.030 | 0.009 | 0.017 | 0.019 | 0.030 | 0.010 | 0.013 |
| M41 (MK937830-China) | 0.018 | 0.034 | 0.025 | 0.039 | 0.018 | 0.034 | 0.025 | 0.037 |
Abbreviations: IBV, infectious bronchitis virus; Mass, Massachusetts.
The first 1620 nucleotides, starting at the AUG translation start codon, of the S1 protein genes were compared.
NT, nucleotide; AA, amino acid.