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. 2020 Sep 1;99(11):5440–5451. doi: 10.1016/j.psj.2020.08.037

Table 1.

The p-distances of S1 coding region1 between our IBV isolates and the vaccine strains.

Strain LJL/130906
LJL/140820
I1124/16
I0306/17
NT2 AA2 NT AA NT AA NT AA
H120 (M21970-Netherlands) 0.020 0.024 0.002 0.004 0.020 0.024 0.001 0.000
H120 (MK071267-Brazil) 0.021 0.026 0.002 0.006 0.021 0.026 0.002 0.002
H120 commercial vaccine D (KU736751-Brazil) 0.003 0.007 0.018 0.020 0.002 0.004 0.020 0.020
H120 (EU822341-China-Taiwan) 0.019 0.022 0.002 0.006 0.019 0.022 0.002 0.002
H120 (FJ807652-China) 0.020 0.026 0.003 0.009 0.020 0.026 0.004 0.006
H120 (MK937831-China) 0.020 0.024 0.001 0.004 0.020 0.024 0.003 0.004
H120 (FJ888351-China) 0.020 0.024 0.001 0.004 0.020 0.024 0.003 0.004
H120 (KF188436-India) 0.019 0.022 0.001 0.002 0.019 0.022 0.002 0.002
H120 (GU393335-USA) 0.020 0.022 0.001 0.002 0.020 0.022 0.002 0.002
H120 (KR605489-Iran) 0.021 0.024 0.002 0.004 0.021 0.024 0.001 0.000
W93 (AY842862-China 0.022 0.028 0.003 0.007 0.022 0.028 0.005 0.007
D41 (AH014596-China) 0.022 0.030 0.004 0.009 0.022 0.030 0.006 0.009
HK (AY761141-China) 0.020 0.024 0.002 0.007 0.020 0.024 0.004 0.007
H94 (DQ515801-China) 0.022 0.028 0.003 0.007 0.022 0.028 0.005 0.007
IBN (AY856348-China) 0.021 0.026 0.002 0.006 0.021 0.026 0.004 0.006
Ma5 (KY626045-Brazil) 0.019 0.024 0.001 0.000 0.019 0.024 0.004 0.004
Mass commercial vaccine (EU359657-USA) 0.001 0.002 0.020 0.023 0.001 0.002 0.021 0.023
H52 (EU817497-China) 0.019 0.030 0.009 0.017 0.019 0.030 0.010 0.013
M41 (MK937830-China) 0.018 0.034 0.025 0.039 0.018 0.034 0.025 0.037

Abbreviations: IBV, infectious bronchitis virus; Mass, Massachusetts.

1

The first 1620 nucleotides, starting at the AUG translation start codon, of the S1 protein genes were compared.

2

NT, nucleotide; AA, amino acid.