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. 2020 Apr 22;13(8):2086–2100. doi: 10.1111/eva.12967

TABLE 3.

Clonal and genetic diversities of the cultivated populations of Agarophyton chilense, from the regions of Concepción and Puerto Montt, per sampling date

Region Sampling site Year Effect EQ c N MLG (N SU) R β H E Â F IS
Concepcion (impacted by earthquake) Lirquen 2009 Before 0.8   6 (16) 0.33 >0 0.36 (0.21) 2.6 −0.63 ***
2010 EQ 0.3 8 (14) 0.54 0.45 0.48 (0.30) 2.8 −0.06 (ns)
2012 After   9 (18) 0.47 0.41 0.50 (0.11) 2.8 −0.36 ***
Lenga 2003 Before 0.3   4 (7) 0.5 0.44 (0.07) 2.2 −0.12 (ns)
2004 Before   16 (25) 0.63 0.80 0.35 (0.20) 2.6 0.23 **
2010 EQ   1 12 (28) 0.41 0.33 0.43 (0.19) 2.6 0.03 (ns)
2012 After   3 (31) 0.07 0.05 0.24 (0.24) 1.6 −0.86 ***
Tubul 2004 Before     42 (64) 0.65 1.15 0.59 (0.12) 3.0 −0.19 ***
2009 Before 0.6   14 (19) 0.72 0.96 0.57 (0.11) 2.8 −0.01 (ns)
2010 EQ 0.95 19 (32) 0.58 0.47 0.60 (0.12) 3.0 −0.05 (ns)
2012 After   8 (23) 0.32 0.25 0.58 (0.12) 2.8 −0.26 **
Puerto Montt (nonimpacted) Pietra Azul 2002 Nonimpacted     13 (61) 0.20 0.24 0.53 (0.10) 2.6 −0.32 ***
2009 Nonimpacted 0.2   8 (30) 0.24 0.36 0.54 (0.15) 2.6 −0.45 ***
2010 Nonimpacted 1 20 (31) 0.63 1.04 0.59 (0.09) 2.6 −0.08 (ns)
2012 Nonimpacted   12 (29) 0.39 0.61 0.56 (0.14) 3.0 −0.35 ***
Metri 2004 Nonimpacted     5 (28) 0.15 >0 0.33 (0.30) 2.0 −0.88 ***
2010 Nonimpacted 0.95   7 (25) 0.25 >0 0.34 (0.25) 2.0 −0.82 ***
2012 Nonimpacted   6 (28) 0.19 0.93 0.32 (0.23) 1.8 −0.81 ***
Chaica 2004 Nonimpacted     7 (64) 0.10 0.07 0.46 (0.22) 3.0 −0.80 ***
2009 Nonimpacted 1   2 (17) 0.06 >0 0.28 (0.26) 1.6 −0.85 ***
2010 Nonimpacted 0.9 6 (26) 0.20 0.18 0.50 (0.17) 2.8 −0.38 ***
2012 Nonimpacted   7 (27) 0.23 0.11 0.51 (0.18) 3.0 −0.5 ***

The status of each population is described in the column “effect EQ” (effect earthquake). For impacted populations, we distinguished three substatus, before earthquake (status before), directly after it (status EQ), and 2 years after (status after). We estimated rates of clonality (c ) from transitions of genotype frequencies between two sampling dates using ClonEstiMate. The number of multilocus genotypes (N MLG) over the number of sampling units (N SU), clonal diversity (R), and the parameter β of the Pareto's distribution was computed using Genclone v2.0. Expected heterozygosity (H E) associated with its standard deviation, allelic richness (Â), and inbreeding coefficient F IS was estimated with Genetix v4.05 (ns: nonsignificantly different from 0, *: p < .05, **: p < .01 and ***: p < .001).