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. 2020 Jul 22;9(8):1751. doi: 10.3390/cells9081751

Table 2.

Summary table of main results from selected scRNA-seq studies classifying cell types from different tumors.

Source of Cells Assayed Seq. Method Number of Cells Key Results Ref.
Circulating tumor cells (CTCs) from breast cancer patient Hydro-seq 666 Identified the cells based on expression of ER, PR, and HER2 which could act as biomarkers [19]
Human renal tumors and normal tissue from fetal, pediatric, and adult kidneys - 72,501 Identified total 110 subtypes of cells [21]
Primary glioblastomas cells from patients SMART-seq 430 Cells from each tumor patients demonstrate higher overall intratumoral coherence, and several cells showed positive correlations with cells from other tumors [20]
Breast cancer cells from patients Tru-seq 515 Identified 11 clusters, mixture of tumor cells and immune cells [61]
T-cells that were isolated from peripheral blood, tumor tissue, and adjacent healthy tissue from hepatocellular carcinoma patients Smart-seq2 5063 Eleven subpopulations of T-cells were identified based on their molecular and functional properties [65]
Primary PDAC tumors and control pancreases - 57,530 Identified 10 main clusters (type 1 ductal, type 2 ductal, acinar, endocrine, endothelial, fibroblast, stellate, macrophage, and T and B cells) [66]
Neuroblastoma cells from donor patients and cell lines ChIP-seq - Three heterogeneous cell types in neuroblastoma cell lines: (i) sympathetic noradrenergic cells, (ii) neural crest cells, and (iii) a mixed type [67]
Bone marrow aspirates from AML patients and healthy donors Seq-Well 38,410 Differentiated monocyte-like AML cells expressed diverse immunomodulatory genes [68]