Table 1.
# | HAPLOTYPE | F 2 | β | STAT | P | EMP1 | EMP2 |
---|---|---|---|---|---|---|---|
1 | GGTGAGAACGAAGGG | 0.08 | −1.17 × 103 | 0.46 | 0.499 | 0.504 | 1.00 |
2 | AAAGGAGAAGGGAAG | 0.07 | −2.17 × 103 | 1.66 | 0.200 | 0.199 | 1.00 |
3 | AGTGAGAAAAGAAGA | 0.06 | −2.25 × 103 | 1.17 | 0.281 | 0.282 | 1.00 |
4 | GGTGGGGGAGGAAAG | 0.05 | 1.16 × 104 | 36.00 | 2.54 × 10−8 | 5.00 × 10−6 | 1.00 × 10−5 |
5 | GGTGAGAGCAAGAAG | 0.04 | 2.11 × 103 | 0.58 | 0.447 | 0.454 | 1.00 |
6 | GGTGAGAAAGGAAGG | 0.04 | −593 | 0.08 | 0.780 | 0.781 | 1.00 |
7 | GGTAAGAAAGAAAAG | 0.03 | −4.07 × 103 | 1.68 | 0.198 | 0.198 | 1.00 |
8 | GGTGAGGGCGAGAAG | 0.03 | −375 | 0.03 | 0.871 | 0.872 | 1.00 |
9 | GGTAGAAGAAAGAGG | 0.03 | 4.91 × 103 | 2.06 | 0.154 | 0.150 | 0.98 |
10 | AGTGAGAAAGGGAAG | 0.03 | −550 | 0.04 | 0.849 | 0.850 | 1.00 |
11 | AAAAGAAGCGGAAGG | 0.03 | 1.97 × 103 | 0.39 | 0.534 | 0.541 | 1.00 |
12 | AGTAGGGGAAGAAAG | 0.03 | −2.25 × 103 | 0.34 | 0.559 | 0.572 | 1.00 |
13 | AGTAGAAGCGGAAGG | 0.03 | −1.99 × 103 | 0.33 | 0.564 | 0.576 | 1.00 |
14 | GGTGGAAAAGGAAGG | 0.03 | 3.50 × 103 | 0.63 | 0.429 | 0.449 | 1.00 |
15 | GGTGAGAACAAGGGG | 0.02 | −3.13 × 103 | 1.33 | 0.251 | 0.253 | 1.00 |
16 | AGTGGAAAAGAAAGG | 0.02 | 5.67 × 103 | 3.83 | 0.053 | 0.049 | 0.70 |
17 | GGTGAGAAAAGAAGA | 0.02 | −4.01 × 103 | 1.97 | 0.163 | 0.162 | 0.99 |
18 | AGAGAAGACGAAAAG | 0.02 | −428 | 0.02 | 0.902 | 0.905 | 1.00 |
19 | AGAGAAGACGAAGGG | 0.01 | −1.53 × 103 | 0.20 | 0.658 | 0.668 | 1.00 |
20 | GAAAAGAACAAGGGG | 0.01 | −864 | 0.03 | 0.873 | 0.898 | 1.00 |
21 | GGTGAGAGAAAGGAG | 0.01 | 3.57 × 103 | 0.87 | 0.353 | 0.365 | 1.00 |
22 | GGTAGAAAAGGAAAG | 0.01 | 480 | 0.01 | 0.929 | 0.944 | 1.00 |
23 | GGTGAGAACGAAAAG | 0.01 | −1.45 × 103 | 0.14 | 0.706 | 0.716 | 1.00 |
24 | GGTGAGAAAGGAGGG | 0.01 | 3.44 × 103 | 1.00 | 0.319 | 0.325 | 1.00 |
1 column definitions: F- frequency in sample, β- regression coefficient, STAT- coefficient t-statistic, P- asymptotic p-value for t-statistic, EMP1- empirical p-value (adaptive), EMP2- corrected empirical p-value. 2 Frequency of the haplotype allele was calculated based on 220 BeadChips.