Table 3.
UPB1 variants identified in β-UP deficient patients.
db SNP rsID | Location | Nucleotide Change | Amino Acid Substitution | Expression System | Substrates | Effect | References |
---|---|---|---|---|---|---|---|
– | Exon 1 | c.38T > C | p.L13S | E. coli | bUPA | 6% of wild-type β-UP | [95] |
rs200145797 | Exon 1 | c.91G > A | p.G31S | HEK293 | bUPA | 52% of wild-type β-UP | [97] |
rs121908066 | Exon 2 | c.209G > C | p.R70P | No reports of in vitro study | [98] | ||
rs34035085 | Exon 2 | c.254C > A | p.A85E |
E. coli RKO |
bUPA bUPA |
No function 2.7% of wild-type β-UP |
[93] [101] |
– | Exon 6 | c.703G > A | p.G235R | E. coli | bUPA | No function | [95] |
rs144135211 | Exon 6 | c.706C > T | p.R236W | E. coli | bUPA | No function | [95] |
rs145766755 | Exon 7 | c.792C > A | p.S264R | E. coli | bUPA | 20% of wild-type β-UP | [95] |
– | Exon 7 | c.811G > A | p.E271K | HEK293 | bUPA | 0.7% of wild-type β-UP | [97] |
– | Exon 7 | c.851G > T | p.C284F | No reports of in vitro study | [99] | ||
rs1375840064 | Exon 7 | c.853G > A | p.A285T | No reports of in vitro study | [99] | ||
– | Exon 7 | c.857T > C | p.I286T | HEK293 | bUPA | 70% of wild-type β-UP | [97] |
rs118163237 | Exon 9 | c.977G > A | p.R326Q |
E. coli HEK293 |
bUPA bUPA |
No function 1.3% of wild-type β-UP |
[95] [97] |
rs369879221 | Exon 10 | c.1076C > T | p.T359M | E. coli | bUPA | No function | [95] |