AIEC	Adherent-invasive E. coli
ATG16L1	Autophagy related 16 like 1
BMP2	Bone morphogenetic protein 2
Caco-2-cl1	Caco-2 clone 1
CD	Crohn’s disease
CFUs	Colony-forming units
EOMES	Eomesodermin
FAE	Follicle associated epithelium
IECs	Intestinal epithelial cells
IGF	Insulin-like growth factor
LB	Luria–Bertani
LPF	Long polar fimbriae
M cells	Microfold or membranous cells
MEF2D	Myocyte enhancer factor 2d
miRNA, miR	MicroRNA
NAMPT	Nicotinamide phosphoribosyltransferase
NOD2	Nucleotide-binding oligomerization domain 2
SNP	Single nucleotide polymorphism
TBX3	T-box transcription factor 3
TEER	Transepithelial electrical resistance
TLR	Toll-like receptors