Table 1.
Gene | Function and Scope of Use | Sequence (5′→3′) | Reference |
---|---|---|---|
IGS | Reference gene | F: GGCCTATAGCTCAGCTGGTTA | Rantsiou et al. 2012 [14] |
R: GCTGAGCTAAGGCCCCATAAA | |||
P: FAM-ATAAGAAATACAAATAATCATACCCTTTTAC-TAMRA | |||
plcA | Escape from primary vacuoles | F: CTAGAAGCAGGAATACGGTACA | Rantsiou et al., 2012 [14] |
R: ATTGAGTAATCGTTTCTAAT | |||
P: HEX-AATTTATTTAAATGCATCACTTTCAGGT-TAMRA | |||
hly | Lysis of vacuoles | F: CATGGCACCACCAGCATCT | Rodríguez-Lázaro et al., 2004 [20] |
R: ATCCGCGTGTTTCTTTTCGA | |||
P: HEX-CGCCTGCAAGTCCTAAGACGCCA-TAMRA | |||
iap | Invasion associated secreted endopeptidase | F: AATCTTTAGCGCAACTTGGTTAA | Rodríguez-Lázaro et al., 2004 [20] |
R: CACCTTTGATGGACGTAATAATACTGTT | |||
P: HEX-CAACACCAGCGCCACTAGGACG-TAMRA | |||
sigB | Transcription factor, regulation of virulence and stress-response genes | F: CCAAGAAAATGGCGATCAAGAC | Rantsiou et al., 2012 [14] |
R: CGTTGCATCATATCTTCTAATAGCT | |||
P: HEX-TGTTCATTACAAAAACCTAGTAGAGTCCAT-TAMRA |
F, forward; R, reverse; P, probe; FAM/HEX, fluorochrome at 5′-end of the probe; and TAMRA, quencher of FAM/HEX at 3′-end of the probe.