Table 1. WI-38 assembly statistics. Statistics from the phased and unphased versions of our WI-38 assembly are compared to the human reference genome GRCh38.
Scaffold Statistics | Contig Statistics | Phase Block Statistics | |||
---|---|---|---|---|---|
GRCh38 | WI-38 Hybrid | GRCh38 | WI-38 PacBio | WI-38 Hybrid Assembly | |
Total length | 3,099,750,718 | 2,926,722,723 | 2,948,627,383 | 2,856,962,926 | 2,723,408,086 |
N50 | 145,138,636 | 96,057,442 | 50,761,348 | 26,668,154 | 2,771,792 |
N90 | 80,373,285 | 33,842,722 | 8,276,615 | 2,966,364 | 227,383 |
Gap count | 1,094 | 12,707 | N/A | N/A | N/A |
L50 | 7 | 11 | 20 | 34 | 304 |
L90 | 17 | 32 | 78 | 223 | 1,588 |