Table 5.
The execution time of SW local alignment algorithm versus FLAT using IMO-PSO and other algorithms.
| m X n | Search agent # |
SCA | ASCA-PSO | IMO | Improved IMO |
IMOG | DIMO |
|---|---|---|---|---|---|---|---|
| 250000 | 40 | 4.70 | 6.04 | 5 | 14 | 5 | 5 |
| 350000 | 40 | 4.70 | 6.04 | 5 | 13 | 5 | 5 |
| 550000 | 100 | 12.0 | 12.7 | 12 | 32 | 12 | 12 |
| 750000 | 120 | 14.3 | 14.9 | 15 | 32 | 14 | 14 |
| 1000000 | 150 | 18.8 | 18.9 | 22 | 48 | 21 | 23 |
| 1400000 | 180 | 21.7 | 21.7 | 22 | 54 | 21 | 22 |
| 1800000 | 200 | 25.0 | 26.0 | 24 | 59 | 23 | 26 |
| 2200000 | 240 | 29.0 | 30.2 | 48 | 113 | 49 | 55 |
| 2600000 | 400 | 49.2 | 51.2 | 48 | 112 | 47 | 46 |
| 3000000 | 400 | 49.2 | 51.2 | 53 | 139 | 52 | 51 |
| 4000000 | 450 | 53.9 | 55.9 | 53 | 141 | 52 | 50 |
| 5000000 | 450 | 53.9 | 55.9 | 54 | 139 | 52 | 51 |
| 6000000 | 450 | 53.9 | 55.9 | 54 | 139 | 52 | 51 |
| 7000000 | 500 | 67.0 | 69.8 | 59 | 140 | 64 | 57 |
| 8000000 | 700 | 78.9 | 83.7 | 77 | 208 | 75 | 88 |
| 9000000 | 700 | 78.9 | 83.7 | 77 | 202 | 75 | 107 |