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. 2020 Sep 3;96:106683. doi: 10.1016/j.asoc.2020.106683

Table 5.

The execution time of SW local alignment algorithm versus FLAT using IMO-PSO and other algorithms.

m X n Search
agent #
SCA ASCA-PSO IMO Improved
IMO
IMOG DIMO
250000 40 4.70 6.04 5 14 5 5
350000 40 4.70 6.04 5 13 5 5
550000 100 12.0 12.7 12 32 12 12
750000 120 14.3 14.9 15 32 14 14
1000000 150 18.8 18.9 22 48 21 23
1400000 180 21.7 21.7 22 54 21 22
1800000 200 25.0 26.0 24 59 23 26
2200000 240 29.0 30.2 48 113 49 55
2600000 400 49.2 51.2 48 112 47 46
3000000 400 49.2 51.2 53 139 52 51
4000000 450 53.9 55.9 53 141 52 50
5000000 450 53.9 55.9 54 139 52 51
6000000 450 53.9 55.9 54 139 52 51
7000000 500 67.0 69.8 59 140 64 57
8000000 700 78.9 83.7 77 208 75 88
9000000 700 78.9 83.7 77 202 75 107