TABLE 2.
Summary statistics of loci assembled per sample for both exons‐only and exons + supercontigs data sets
| Species | Number of loci (#/%) | Locus length range (bp) (exons‐only/supercontigs + exons) | Mean locus length (±SD bp) (exons‐only/supercontigs + exons) |
|---|---|---|---|
| Robust corals | |||
| Cyphastrea serailia a | 386/85.40 | 93–1,923/156–4,356 | 443 ± 223/847 ± 597 |
| Diploastrea heliopora | 401/88.71 | 87–1,920/117–4,414 | 444 ± 228/802 ± 555 |
| Dipsastraea maxima a | 381/84.29 | 93–1,611/126–4,694 | 432 ± 194/853 ± 594 |
| Goniastrea retiformis | 393/86.95 | 93–1,395/99–4,479 | 439 ± 199/860 ± 608 |
| Herpolitha limax a | 349/77.21 | 93–1,209/126–3,690 | 425 ± 194/834 ± 560 |
| Lobophyllia radians | 389/86.06 | 93–1,572/117–3,619 | 435 ± 203/794 ± 520 |
| Oulastrea crispata a | 323/71.46 | 81–1,878/135–4,247 | 425 ± 236/798 ± 569 |
| Platygyra sinensis a | 383/84.73 | 90–1,674/192–3,950 | 443 ± 215/834 ± 583 |
| Plesiastrea versipora a | 354/78.32 | 93–1,383/147–5,192 | 437 ± 209/823 ± 564 |
| Pocillopora acuta | 258/57.08 | 123–1,587/153–3,531 | 473 ± 234/833 ± 523 |
| Complex corals | |||
| Acropora aspera | 263/58.19 | 111–1,938/144–5,286 | 490 ± 238/1,005 ± 714 |
| Astreopora expansa a | 219/48.45 | 72–1,413/189–2,818 | 424 ± 209/774 ± 507 |
| Fimbriaphyllia ancora a | 343/75.88 | 90–2,895/105–6,837 | 513 ± 322/998 ± 765 |
| Galaxea astreata a | 343/75.88 | 99–2,697/105–8,843 | 521 ± 310/1,053 ± 871 |
| Goniopora lobata | 277/61.28 | 54–1,521/114–5,123 | 430 ± 214/693 ± 498 |
| Pachyseris speciosa a | 325/71.90 | 66–2,889/147–4,947 | 475 ± 288/899 ± 659 |
| Porites lobata a | 311/68.81 | 54–2,208/63–6,595 | 461 ± 259/875 ± 676 |
| Turbinaria mesenterina | 329/72.79 | 96–3,798/111–5,537 | 463 ± 312/934 ± 693 |
| Corallimorpharia | |||
| Rhodactis inchoata | 43/9.51 | 183–717/183–1,773 | 375 ± 144/541 ± 352 |
| Rhodactis indosinensis a | 47/10.40 | 138–759/138–1,291 | 356 ± 123/448 ± 226 |
Percentage of loci is based on total number of loci (n = 452). A supercontig includes both exon and intron regions in a sequence.
a
Samples used in identity checks with COI and histone H3 barcodes.