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. 2020 Sep 3;15(9):e0237792. doi: 10.1371/journal.pone.0237792

Table 2. Estimated odds ratio (OR) for EwS rare variants adjusting for different model covariates.

Wald method (unadjusted) Mantel-Haenszel (study) Mantel-Haenszel (study and variant1)
Rare SNP Common SNP OR (95% CI) Fisher’s P-value OR (95% CI) P-value OR (95% CI) P-value
rs112837127 rs6106336 0.19 (0.10 to 0.39) 1.64×10−8 0.18 (0.08 to 0.37) 6.90×10−9 0.20 (0.09 to 0.40) 5.84×10−8
rs2296730 rs6106336, rs6047482 2.04 (1.58 to 2.69) 9.78×10−9 2.11 (1.60 to 2.77) 4.92×10−8 1.61 (1.16 to 2.24) 3.50×10−3

Models use a dominant allele coding for minor alleles with each individual as the analysis unit.

1Adjustment for contributing study and nearby common SNP(s).