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. 2020 Jul 29;119(5):989–1001. doi: 10.1016/j.bpj.2020.07.016

Figure 5.

Figure 5

Schematic representation and numerical solution of the NLER model. (a) The surface region is rich in NA probes (blue) immobilized on the copolymer coating (shaded area) and hence provides a negative net charge, which further increases upon hybridization with the target strands (dark red). The electrostatic potential is approximated by a step function having a value lower than that of the bulk solution up to a distance h from the RPI solid surface. (b) Fraction of hybridized probes at equilibrium and (c) kinetic rate computed for different surface densities of probes, from 1010 mm−2 (blue) to 1011 mm−2 (red). The curves were computed with fixed kinetic parameters kon0 = 2.3 × 10−4 nM−1 s−1 and koff = 7.2 × 10−4 s−1 and for Γ = γsp, with γ = 2 × 10−11 mm2. To see this figure in color, go online.