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. 2020 Sep 2;8:e9818. doi: 10.7717/peerj.9818

Table 3. Polymerase Chain Reaction and High Resolution Melt condition used to screen haplotype variation in wild Cyclopia intermedia populations.

Primer annealing temperature (Tm) for the various primer combinations used in this study are provided in Table 2.

Process Step Temperature Time Number of cycles
PCR Amplification Initial Denaturing 95 °C 2 min 1
Denaturing 95 °C 10 s 40
Annealing + Plate Read Primer Tm 30 s
Extension + Plate Read 72 °C 30 s
HRM Analysis Heteroduplex Formation 95 °C 30 s 1
60 °C 1 min 1
HRM + Plate Read 65–95 °C (in 0.2 °C increments) 10 sec/step 1