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. Author manuscript; available in PMC: 2020 Sep 5.
Published in final edited form as: J Am Chem Soc. 2020 May 19;142(22):9993–9998. doi: 10.1021/jacs.0c00383

Table 1.

Calculated Active Site Electric Fields and Their Geometry Relative to the Ligand’s C=O Bond Vectora

coordinatesa DHN (Substrate like) 19NT (TS like) TS
X-ray (1) gas phase opt. (2) X-ray (6) gas phase opt. (7) gas phase opt. (5)
Field magnitudeb |Fenz| (MV/cm) −139.5 −105.3 −160.4 −100.9 −151.8
Feld projectionc Fenz u^CO  (MV/cm) −127.6 −83.5 −141.7 −76.1 −144.6
%alignedd 91% 79% 88% 75% 95%
Δstabilizatione (kcal mol−1) 6.6 reference 10.7 reference /
C=O…O16 (Å) 2.53 / 2.57 / 2.70
C=O…O103 (Å) 2.76 / 2.65 / 2.48
a

See Table S2 and Figure S3 for complete simulation scheme and results. The number of each entry corresponds to the respective species in Figure 3 and Figure S3.

b

The electric field magnitude, |Fenz|, is the average of the magnitude of the enzyme’s electric field at the C and O atoms of the bound ligand.

c

The electric field projected on the carbonyl is calculated by Fenzu^CO, and also equals |Fenz| · %aligned, where |Fenz| is the magnitude of the enzyme’s field.

d

The %aligned is calculated by eq 3.

e

Δstabilization (the stabilization energy gained from C=O distortion) is the difference of the field projection multiplied by the dipole of the carbonyl (1 MV cm−1 D ≃ 0.048 kcal mol−1).