Table 3.
Summary of recombination events in the CN/Liaoning25/2018 strain identified using the RDP4 software.
| Parental virus |
Region | Breakpointsa |
Score for the seven detection methods embedded in RDP4b |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Major | Minor | Begin | End | RDP | GENECONV | BootScan | MaxChi | Chimaera | SiScan | 3Seq | |
| SQ2014 | CN/GDZQ/2014 | S gene | 20,597 | 247,58 | 8.1 × 10−93 | 6.0 × 10−90 | 9.4 × 10−90 | 3.5 × 10−40 | 7.7 × 10−39 | 4.0 × 10−40 | 2.2 × 10−15 |
a
The breakpoints were based on the locations in the genome of CN/Liaoning25/2018.
b
The P-value cutoff was set at 0.01.