Table 6. Haplotype association of MDM2 htSNPs with lung cancer riska.
Haplotypeb | Constructionc | Case frequency | Control frequency | OR (95% CI) | P value |
---|---|---|---|---|---|
1 | AGCAA | 0.476 | 0.4844 | 1.00 (Reference) | – |
2 | ATAGA | 0.1303 | 0.1403 | 1.00 (0.77–1.28) | 0.98 |
3 | GGAGA | 0.1456 | 0.1219 | 1.17 (0.91–1.51) | 0.23 |
4 | GGCGA | 0.1021 | 0.1073 | 0.97 (0.73–1.29) | 0.82 |
5 | AGCGA | 0.0279 | 0.0552 | 0.52 (0.33–0.82)d | 0.0053d |
6 | AGAGA | 0.0284 | 0.0311 | 1.07 (0.64–1.79) | 0.79 |
7 | ATCGA | 0.0242 | 0.0142 | 1.64 (0.81–3.31) | 0.17 |
8 | AGAGG | 0.0196 | 0.0121 | 1.41 (0.72–2.76) | 0.32 |
9 | AGAAA | 0.009 | 0.0164 | 0.54 (0.23–1.29) | 0.17 |
Rare | – | NA | NA | 2.23 (1.21–4.09)d | 0.0099d |
a, global haplotype association P value: 0.0036, adjusted for smoking duration; b, five-locus order: rs1690924-rs1846402-rs2291857-rs3730581-rs3730635; c, underlined indicates minor allele; d, statistical significance.