TABLE 2.

Beta diversity associations with tuna rearing condition or phenotype (adonis 999 permutations).

UniFrac	Grouping	Body_site	n	Treatment	Df	F. model	R2	P
Unweighted	Full-dataset		93	Comp	4	2.1851	0.08943	0.001
			93	prazy_treatment	1	2.4757	0.0262	0.002
			93	sample_type2	2	5.7308	0.11186	0.001
		Gill	22	prazy_treatment	1	1.5394	0.0683	0.048
			22	comp	4	1.1443	0.20274	0.161
			22	sbt_fluke_eggs_in_gill	20	1.0144	0.91026	0.463
			22	sbt_heart_flukes_count	5	0.91684	0.21239	0.714
			22	host_body_mass_index	21	1.5932	0.97098	0.064
			22	host_weight_grams	19	1.3644	0.89628	0.045
			22	host_height_mm	12	0.98172	0.54088	0.553
		Skin	32	prazy_treatment	1	1.7264	0.05275	0.075
			32	comp	3	2.406	0.19929	0.001
			32	sbt_fluke_eggs_in_gill	27	0.89616	0.82875	0.698
			32	sbt_heart_flukes_count	2	0.84129	0.05311	0.682
			32	host_body_mass_index	31	3.3818	0.99055	0.065
			32	host_weight_grams	27	1.2918	0.87462	0.119
			32	host_height_mm	17	1.4676	0.62452	0.008
		Digesta	37	prazy_treatment	1	2.8504	0.07337	0.001
			37	comp	4	1.9966	0.19486	0.001
			37	sbt_fluke_eggs_in_gill	31	1.052	0.84461	0.374
			37	sbt_heart_flukes_count	3	0.68854	0.05727	0.962
			37	host_body_mass_index	35	1.4564	0.96225	0.099
			37	host_weight_grams	30	0.92761	0.79901	0.709
			37	host_height_mm	16	1.008	0.43439	0.472
Weighted	Full-dataset	Gill, skin, digesta	93	comp	4	2.459	0.09952	0.001
			93	prazy_treatment	1	3.4969	0.03662	0.005
			93	sample_type2	2	13.065	0.22309	0.001
		Gill	22	prazy_treatment	1	2.3018	0.09878	0.017
			22	comp	4	1.427	0.24077	0.074
			22	sbt_fluke_eggs_in_gill	20	1.9204	0.9505	0.089
			22	sbt_heart_flukes_count	5	1.2696	0.27189	0.229
			22	host_body_mass_index	21	0.60888	0.92747	0.887
			22	host_weight_grams	19	1.2531	0.8881	0.294
			22	host_height_mm	12	0.7302	0.46702	0.919
		Skin	32	prazy_treatment	1	2.9904	0.08798	0.016
			32	comp	3	4.1121	0.29844	0.001
			32	sbt_fluke_eggs_in_gill	27	1.1283	0.85901	0.405
			32	sbt_heart_flukes_count	2	1.8973	0.11229	0.054
			32	host_body_mass_index	31	32.779	0.99902	0.084
			32	host_weight_grams	27	1.4338	0.88561	0.257
			32	host_height_mm	17	1.1142	0.55806	0.343
		Digesta	37	prazy_treatment	1	1.7085	0.04531	0.142
			37	comp	4	1.4055	0.14556	0.148
			37	sbt_fluke_eggs_in_gill	31	0.92329	0.8267	0.618
			37	sbt_heart_flukes_count	3	1.4708	0.11487	0.127
			37	host_body_mass_index	35	3.6597	0.98463	0.035
			37	host_weight_grams	30	1.0191	0.81369	0.446
			37	host_height_mm	16	1.1161	0.45957	0.288