TABLE 1.
General properties and genetic characteristics of S. Weltewreden strains isolated from shrimp and tilapia.
Strain namea | Country of origin | Genome size (bp) | Number of contigs | n50 | Resistance genes and mutations | Plasmid replicon |
24C | China | 4,969,946 | 140 | 197,156 | aac(6′)-Iaa, parC p.T57S | |
28C | China | 5,127,676 | 106 | 147,023 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
30C | China | 4,865,581 | 94 | 175,961 | aac(6′)-Iaa, parC p.T57S | – |
62C | China | 5,006,616 | 92 | 147,023 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
75C | China | 4,983,794 | 146 | 111,941 | aac(6′)-Iaa, strA, strB, sul2, tet(A), parC p.T57S | IncFII(S), IncQ1 |
85C | China | 5,041,289 | 104 | 134,960 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
3V | Vietnam | 5,075,193 | 132 | 134,960 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
13V | Vietnam | 5,075,009 | 126 | 113,728 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
28V | Vietnam | 4,969,248 | 76 | 143,942 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
30V | Vietnam | 5,073,625 | 133 | 139,995 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
74V | Vietnam | 5,087,031 | 120 | 108,166 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
95V | Vietnam | 5,160,245 | 120 | 134,960 | aac(6′)-Iaa, parC p.T57S | IncFII(S) |
aAll strains from China were isolated from tilapia and the Vietnamese strains originated from shrimp.