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. 2020 Aug 6;32:106141. doi: 10.1016/j.dib.2020.106141
Subject Microbiology
Specific subject area Applied Microbiology
Type of data Table
Figure
16S rDNA illumine sequences
How data were acquired Amplicon metasequencing using Illumina HiSeq platform
Data format Raw data in FASTQ format
Analyzed
Parameters for data collection Fecal samples were collected for microbial analysis from adolescents over 15 years old, who signed voluntary informed consent forms. The data collection was approved by the Ethics Committee of Scientific centre for Family Health and Human Reproduction Problems (protocol N6 from 21 December 2015). Adolescents were grouped according to body mass index into three groups: normal body mass (23 persons), obesity (BMI ≥ 95 percentile) (20), and obesity with irritable bowel syndrome (IBS) (10).
Description of data collection Total DNA was extracted from stool samples, the V3-V4 variable regions of 16S rDNA were amplified, and paired-end sequenced according to Illumina protocol using Illumine platform.
Data source location Institution: Scientific centre for Family Health and Human Reproduction Problems
City: Irkutsk
Country: Russia
Data accessibility Raw data were deposited to NCBI
Repository name: SRA
Data identification number: BioProject PRJNA604466, BioSamples from SAMN13972309 to SAMN13972361.
Direct URL to data: https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA604466
Related research article Belkova N.L., Nemchenko U.M., Pogodina A.V., Feranchuk S.I., Romanitsa A.I., Novikova E.A., Rychkova L.V. Composition and Structure of Gut Microbiome in Adolescents with Obesity and Different Breastfeeding Duration. // Bulletin of Experimental Biology and Medicine. 2019. V. 167, No. 6. P. 759–762. Translated from Byulleten’ Eksperimental'noi Biologii i Meditsiny, Vol. 167, No. 6, pp. 717–721.
DOI 10.1007/s10517–019–04617–7