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. 2020 Aug 27;16(8):e1008896. doi: 10.1371/journal.pgen.1008896

Fig 2. SURFDAWave classifier performance compared to Trendsetter, diploS/HIC, and evolBoosting when differentiating between sweeps and neutrality and trained and tested with simulations based on CEU (top row) and YRI (bottom row) demographic history.

Fig 2

(Left) Power to differentiate between sweep and neutrality by comparing the probability of a sweep under sweep simulations with the same probability in simulations of neutrality including zoomed in region between 0.0 and 0.2 on the x-axis and 0.8 and 1.0 on the y-axis. (Right confusion matrices) Confusion matrices comparing classification rates of the methods. SURFDAWave applied using Daubechies’ least-Asymmetric wavelets to estimate spatial distributions of summary statistics with γ penalties and level chosen through cross validation (see Training the models). Summary statistics π^, H1, H12, H2/H1, and frequency of the first, second, third, fourth, and fifth most common haplotypes used by both Trendsetter and SURFDAWave.