Subject	Neurogenetics
Specific Area	Psychiatric epigenetics
Type of data	Tables, Raw sequencing data
How data was acquired	Genomic DNAs were isolated, digested with MspI, gel-purified, treated with bisulfite and subjected to sequencing by RRBS method to obtain 40X coverage of the individual CpG islands
Data format	Raw (files): FASTQ files
	Analyzed (files): bedGraph files
Parameters for data collection	R1 and Dnmt1tet/tet (Tet/Tet) mouse embryonic stem cell lines, Reduced Representation Bisulfite Sequencing, bedGraph files for data visualization.
Description of data collection	Genomic DNAs from the cells above were digested with MspI, ligated to adapters, bisulfite converted and amplified to generate sequencing libraries by RRBS protocol. The libraries were sequenced by Next Generation Sequencing.
Data source location	Birla Institute of Technology and Science, Pilani Hyderabad Campus Hyderabad, India
Data accessibility	Repository name: Gene Expression OmnibusData identification number: GSE152817Direct URL to data: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE152817Raw data links for reviewer access: 1.R1 and Tet/Tet ESCs:https://epiquest.s3.amazonaws.com/epiquest_zr2736/VO8JI2S1LTLRLHuw2554zyxzv4W2JN/zr2736_download_fastq.txt 2.R1 and Tet/Tet neurons:https://epiquest.s3.amazonaws.com/epiquest_zr2544/YEZXTG7LQML2WYT6YEWAYRQTXV34AKZ5/09092019_new_rbs/zr2544_download_fastq.txt
Related research article	S. Saxena, P.A. Maroju, S. Choudhury, A. Anne, K.N. Mohan, Analysis of transcript levels of a few schizophrenia candidate genes in neurons from a transgenic mouse embryonic stem cell model overexpressing DNMT1, Gene. 757 (2020) 144934. https://doi.org/10.1016/j.gene.2020.144934.