Table 1.
Proof-of-concept testing of IEDB and NetMHCIIpan algorithms.
| Protein | HLA Allele | Published Epitope | IEDB | NetMHCIIpan |
|---|---|---|---|---|
| H1N1 | B*35:01 | LPFDRTTIM | ✓ | |
| Nucleoprotein | B*35:01 | LPFDRPTIM | ✓ | |
| Peanut Ara h 1 | DRB1*01:01 | KEGDVFIMPAAHPVAINASS | ✓ | ✓ |
| DRB1*01:01 | QRSRQFQNLQNHRIVQIEAK | ✓ | ✓ | |
| DRB1*01:01 | DN1LVIQQGQATVTVANGNN | ✓ | ✓ | |
| DRB1*11:01 | TSRNNPFYFPSRRFSTRYGN | ✓ | ✓ | |
| DRB1*04:01 | QRSRQFQNLQNHRIVQIEAK | ✓ | ✓ | |
| DRB1*04:01 | KEGDVFIMPAAHPVAINASS | ✓ | ✓ | |
| DRB1*04:01 | QKESH FVSARPQSQSQSPSS | ✓ | ✓ | |
| DRB1*15:02 | QRSRQFQNLQNHRIVQIEAK | ✓ | ✓ | |
| DRB1*11:01 | LEAAFNAEFNEIRRVLLEEN | ✓ | ||
| DRB1*14:01 | LEAAFNAEFNEIRRVLLEEN | |||
| DRB1*04:04 | NSKAMVIVVVNKGTGNLELV | ✓ | ||
| DRB1*04:01 | FNEIRRVLLEENAGGEQEER | ✓ | ||
| DRB1*11:01 | VVNKGTGNLELVAVRKEQQQ | ✓ | ||
| DRB1*03:01 | NNFGKLFEVKPDKKNPQLQD | ✓ | ||
| DRB1*04:04 | FNEIRRVLLEENAGGEQEER | ✓ | ||
| DRB1*11:01 | LELVAVRKEQQQRGRREEEE | ✓ | ||
| DRB1*14:01 | FNEIRRVLLEENAGGEQEER | |||
| Mugwort Art v 1 | DRB1*01:01 | KCIEWEKAQHGA | ||
| DRB1*01:01 | DKKCIEWEKAQHGA | |||
| DRB1*01:01 | NKKCDKKCIEWEKAQHGA |