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Variant calling results on Sample 2. Four variant callers were tested: SiNVICT, OutLyzer, DeepSNVMiner and UMI-VarCal and for each tool, True Positives (TP), False Positives (FP), False Negatives (FN), sensitivity and specificity are reported.
| Variant Caller | TP | FP | FN | Sensitivity (%) | Specificity (%) |
|---|---|---|---|---|---|
| SiNVICT | 8 | 455 | 7 | 53.4 | 99.4 |
| OutLyzer | 12 | 330 | 3 | 80 | 99.6 |
| DeepSNVMiner | 14 | 2 | 1 | 93.4 | 99.99 |
| UMI-VarCal | 15 | 0 | 0 | 100 | 100 |
