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. 2020 Aug 5:1–17. doi: 10.1080/07391102.2020.1803967

Table 5.

The results obtained from docking of Drugs with 6M0J in site 1.

Drugs S score (kcal/mol) RMSD (Å) Bonds between atoms of compounds and residues of active site 1 of 6M0J
Atom of compound Atom of receptor Involved receptor residues Type of interaction bond Distance (Å) E (kcal/mol)
Chloroquine −6.8442 1.9853 6-ring 6-ring Phe 438 pi-pi 3.37 0
Delapril −7.5271 2.1735 O-31 OE2 Glu 375 H-donor 3.01 −4.5
O-25 NH2 Arg 514 H-acceptor 3.04 −1.4
O-26 ZN Zn 901 metallic 1.96 −2.1
Zn-901 NE2 His 374 2.4 −3.2
NE2 His 378 2.27 −5.7
OE1 Glu 402 2.1 −5.6
NE2 His 378 ionic 2.27 −11.7
OE1 Glu 402 2.1 −14.4
OE2 Glu 402 3.13 −3.7
6-ring OH Tyr 515 Pi-H 3.38 −0.9
6-ring Tyr 510 pi-pi 3.93 0
Enalapril −7.8671 1.9897 O-22 O Pro 289 H-donor 3.39 −0.8
Enalaprilat −6.9279 1.8459 O-44
6-ring
NZ Lys 441 H-acceptor 3.16 −8.4
6-ring Phe 438 pi-pi 3.73 0
Hydroxychloroquine −7.2272 2.1035 6-ring CB Phe 438 pi-H 3.82 −0.8
6-ring 6-ring Phe 438 pi-pi 3.81 0
Lisinopril −7.5918 1.3368 N-11 NE2 Gln 442 H-acceptor 3.18 −2.8
6-ring
6-ring
CA Asn 290 Pi-H 4.07 −0.8
N Ile 291 4.22 −0.9
ORE-1001 −7.3872 1.5557 Cl O Leu 410 H-donor 3.49 −0.8
5-ring CB Phe 438 pi-H 4.43 −0.7
6-ring 6-ring Phe 438 pi-pi 3.37 0
Perindopril −6.4327 2.4655 N-26 O Ile 291 H-donor 3.21 −0.8
Piperaquine −8.6132 2.3325 6-ring 6-ring Phe 438 pi-pi 3.35 0
Quinacrine −8.2350 1.6346 6-ring 6-ring N Ile 291 pi-H 4.81 −0.6
N Ile 291 3.98 −1.1
Quinacrine Mustard −7.8570 1.4398 Cl-58 SD Met 366 H-donor 3.74 −0.4
6-ring
6-ring
N Ile 291 pi-H 3.98 −1.4
6-ring Phe 438 pi-pi 3.58 0
Ramipril −7.7464 1.6166 O-58 N Ile 291 H-acceptor 3.47 −0.8
Ramiprilat −6.9943 2.4607 O-49 Zn Zn 901 metallic 2.01 −3.9
Zn-901 NE2 His 374 2.4 −3.2
NE2 His 378 2.27 −5.7
OE1 Glu 402 2.1 −5.6
NE2 His 378 ionic 2.27 −11.7
OE1 Glu 402 2.1 −14.4
OE2 Glu 402 3.13 −3.7