Skip to main content
. 2020 Aug 14:1–18. doi: 10.1080/07391102.2020.1806930

Table 2.

Binding energies for cross-docking of co-crystallized ligands against all targets.

Protein ΔGBind, kcal/mol
Ligand 6LU7 Ligand 6Y2F Ligand 6Y2G Ligand 5RF8 Ligand 5RG0
6LU7 no water −70.60 −40.19 −40.19 −31.73 −33.63
6LU7 −35.45 −52.22 −52.22 −28.96 −22.09
6Y2E no water −31.81 −35.24 −35.24 −31.68 −27.89
6Y2E −30.59 −12.26 −12.26 −12.29 N/A
6Y2F no water −86.34 −55.94 −55.94 −24.98 −30.79
6Y2F −36.39 −42.77 −42.77 −31.04 −34.45
6Y2G no water −73.20 −57.60 −57.60 −33.33 −24.06
6Y2G −49.07 −19.71 −19.71 −27.50 −21.09
6M03 no water −38.43 −49.68 −49.68 −29.21 −27.07
6M03 −35.77 −13.43 −13.43 −24.15 −17.64
6Y84 no water −18.38 −29.56 −29.56 −27.46 −22.04
6Y84 −29.77 −24.31 −24.31 −18.07 N/A
6RF8 no water −54.89 −49.13 −49.13 −31.42 −23.44
5RF8 −6.50 −15.84 −15.84 N/A N/A
5RG0 no water −59.12 −18.89 −18.89 −25.83 −33.39
5RG0 −20.04 −17.61 −17.61 −15.45 N/A
5R8T no water −31.95 −36.13 −36.13 −31.37 −30.63
5R8T 6.12 −4.43 −4.43 N/A N/A

* N/A – no binding pose were produced.