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. 2020 Sep 9;33(4):e00053-19. doi: 10.1128/CMR.00053-19

TABLE 6.

Summary of ability of 16S rRNA gene target to identify clinically relevant Enterobacterales (formerly Enterobacteriaceae)

Genus No. of sequences in the genus MSAa Total no. of tested positions No. of identical positions No. of divergent positions % Identity
Escherichia 4 1,463 1,435 28 98.09
Shigella 4 1,539 1,530 9 99.42
Pantoea 13 1,424 1,332 92 93.54
Klebsiella 7 1,379 1,322 57 95.87
Raoultella 4 1,453 1,426 27 98.14
Cronobacter 7 1,548 1,499 49 96.83
Enterobacter 11 1,428 1,340 88 93.84
Proteus 5 1,466 1,448 18 98.77
Citrobacter 13 1,456 1,376 80 94.51
Salmonella 2 1,505 1,480 25 98.34
Morganella 0 0
Providencia 9 1,436 1,370 66 95.40
Cedecea 3 1,466 1,446 20 98.64
Edwardsiella 5 1,549 1,537 12 99.23
Hafnia 3 1,415 1,371 44 96.89
Serratia 18 1,379 1,265 114 91.73
Yersinia 18 1,449 1,395 54 96.27
a

MSA, multisequence alignment.