Table 1.
Molecular docking scores and binding features for compound 3a–g and Darunavir with SARS-CoV-2 main protease (Mpro)
No. | Compound | Docking score (kcal/mol) | Binding features (hydrogen bond length in Å |
---|---|---|---|
1 | 3a | − 8.28 | ARG188 (2.18 Å), MET165 (2.63 Å), HIS164 (2.14 Å), GLU166 (2.17 Å, 2.79 Å) |
2 | 3b | − 8.14 | ARG188 (2.81 Å), GLN192 (2.37 Å), THR190 (2.09 Å), GLU166 (2.03 Å) |
3 | 3c | − 7.05 | ARG188 (1.82 Å), THR190 (2.60 Å) GLN192 (1.93 Å), GLU166 (1.82 Å, 1.96 Å) |
4 | 3d | − 8.30 | GLU166 (2.05 Å), ARG 188 (1.80 Å), THR190 (2.08 Å), GLN192 (2.38 Å) |
5 | 3e | − 8.63 | THR190 (2.1 Å), GLN192 (2.38 Å), ARG188 (1.79 Å), GLU166 (2.08 Å) |
6 | 3f | − 7.72 | GLN189 (1.94 Å), GLU166 (2.01 Å, 2.33 Å) |
7 | 3g | − 7.38 | GLU166 (2.82 Å) |
8 | Darunavir | − 8.19 | GLU166 (1.94 Å, 2.88 Å), LEU167 (1.96 Å) |