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. 2020 Sep 7;13:452. doi: 10.1186/s13071-020-04322-9

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 5 — Allele frequencies from field samples, Muguga, Kiambu and Serengeti (collectively referred to as Muguga cocktail), Chitongo, Gikongoro and Nyakizu vaccine isolates. Allele frequencies for loci MS39, MS25, MS7, ms9 and MS19 are presented in (a–e), respectively. On each locus, a high proportion of unique alleles is observed with only a few shared alleles. Muguga cocktail and Nyakizu isolates share alleles with Rwanda field samples on all loci while Gikongoro and Chitongo do not (a–e)