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. 2020 Aug 6;21(13):903–917. doi: 10.2217/pgs-2020-0045

Table 2. . Variants genotyped.

SNP Gene Name Chr. Position Alleles MAF Comment
rs2740204 AVP Arginine vasopressin 20 3081820 [A/C] 0.40  
rs2282018     20 3084302 [T/C] 0.36  
rs3761249     20 3085715 [T/G] 0.10  
rs1587097 AVPR1A Arginine vasopressin receptor 1A 12 63136464 [T/C] 0.12  
rs10784339     12 63144865 [G/C] 0.19  
rs11174811     12 63146695 [A/C] 0.16  
rs3803107     12 63147053 [T/C] 0.18  
rs1042615     12 63150428 [T/C] 0.43  
rs3021530     12 63151308 [A/C] 0.01 MAF <0.05
rs3021529     12 63151899 [T/C] 0.17  
rs10877969     12 63153458 [T/C] 0.16  
rs3759292     12 63153532 [T/C] 0.01 MAF <0.05
rs7294536     12 63154311 [A/G] 0.16  
rs10877970     12 63157373 [A/G] 0.16  
rs33933482 AVPR1B Arginine vasopressin receptor 1B 1 206110066 [T/C] 0.12  
rs33976516     1 206110179 [G/C] 0.03 MAF <0.05
rs28632197     1 206110372 [A/G] 0.01 Call rate <90%
rs28536160     1 206117947 [C/T] 0.04 MAF <0.05
rs3846658 CARTPT CART prepropeptide 5 71714320 [A/T] 0.03 MAF <0.05
rs10515116     5 71714836 [T/C] 0.10  
rs10515114     5 71716479 [A/G] 0.10  
rs10515115     5 71718006 [T/A] 0.39  
rs3857384     5 71718136 [T/C] 0.11  
rs7731997     5 71720740 [A/C] 0.00 MAF <0.05
rs10865918 CCK Cholecystokinin 3 42261818 [A/C] 0.38  
rs754635     3 42263638 [G/C] 0.12  
rs13069836     3 42266416 [T/G] 0.50  
rs2029127     3 42270249 [A/G] 0.00 MAF <0.05
rs6996265 CRH Corticotropin-releasing hormone 8 66174114 [A/G] 0.10  
rs6982394     8 66176241 [A/C] 0.04 MAF <0.05
rs3176921     8 66179143 [A/G] 0.10  
rs6472257     8 66179944 [T/C] 0.10  
rs5030875     8 66181830 [T/G] 0.06  
rs3792738 CRHBP CRH-binding protein 5 76951958 [T/G] 0.07  
rs32897     5 76955146 [T/C] 0.20  
rs6453267     5 76959930 [A/G] 0.00 MAF <0.05
rs7728378     5 76963524 [A/G] 0.39  
rs1875999     5 76969156 [A/G] 0.35  
rs10473984     5 76971300 [A/C] 0.03 MAF <0.05
rs10474485     5 76975027 [T/G] 0.19  
rs1715747     5 76978711 [A/G] 0.34 (rs7704995)
rs1500     5 76981012 [C/G] 0.34  
rs9900679 CRHR1 CRH receptor 1 17 45790791 [G/C] 0.00 MAF <0.05
rs7209436     17 45792775 [A/G] 0.44  
rs4792887     17 45799653 [A/G] 0.09  
rs110402     17 45802680 [T/C] 0.46  
rs242924     17 45808000 [A/C] 0.46  
rs8072451     17 45816349 [A/G] 0.23  
rs81189     17 45817431 [C/G] 0.48  
rs242939     17 45818212 [A/G] 0.07  
rs173365     17 45823707 [A/G] 0.43  
rs1876831     17 45830378 [T/C] 0.23  
rs17689918     17 45832721 [A/G] 0.23  
rs878886     17 45835123 [C/G] 0.23  
rs3779250 CRHR2 CRH receptor 2 7 30654643 [A/G] 0.35  
rs973002     7 30659287 [T/C] 0.17  
rs2270007     7 30660355 [G/C] 0.17  
rs8192498     7 30662195 [A/G] 0.01 MAF <0.05
rs2190242     7 30669858 [A/C] 0.23  
rs2284217     7 30673991 [A/G] 0.21  
rs6967702     7 30682879 [C/G] 0.00 MAF <0.05
rs4723002     7 30686084 [T/C] 0.09  
rs255102     7 30691547 [T/A] 0.31  
rs255105     7 30692490 [T/C] 0.34  
rs255125     7 30703394 [A/G] 0.32  
rs3800373 FKBP5 FKBP prolyl isomerase 5 6 35574698 [A/C] 0.27  
rs7757037     6 35580458 [A/G] 0.47  
rs1360780     6 35639793 [T/C] 0.29  
rs9470080     6 35678657 [T/C] 0.32  
rs1893679 GAL Galanin 11 68682861 [C/G] 0.32  
rs694066     11 68685516 [T/C] 0.08  
rs3136541     11 68690474 [T/C] 0.35  
rs3136542     11 68690542 [A/G] 0.00 MAF <0.05
rs5374 GALR1 Galanin receptor 1 18 77250688 [T/C] 0.36  
rs2717162     18 77256370 [A/G] 0.25  
rs9807208     18 77262298 [A/G] 0.31  
rs5376     18 77268852 [T/C] 0.00 MAF <0.05
rs2915885 GLRA1 Glycine receptor, alpha 1 5 151827506 [T/C] 0.42  
rs11167557     5 151847195 [A/G] 0.42  
rs4075273     5 151858027 [T/G]   Call rate <90%
rs9324714     5 151864201 [A/T] 0.42  
rs1428159     5 151882147 [T/C] 0.42  
rs1346489     5 151886972 [A/G] 0.25  
rs2964608     5 151897327 [A/G] 0.38  
rs1428155     5 151902071 [A/G] 0.39  
rs991738     5 151918887 [A/G] 0.43  
rs1428157     5 151927048 [A/C] 0.32  
rs9902709 HCRT Hypocretin neuropeptide precursor 17 42185328 [A/G] 0.00 MAF <0.05
rs1056526 HCRTR1 Hypocretin receptor 1 1 31619302 [T/C] 0.49  
rs2271933     1 31626923 [A/G] 0.43  
rs2653349 HCRTR2 Hypocretin receptor 2 6 55277538 [A/G] 0.22  
rs11661134 MC2R Melanocortin 2 receptor 18 13878881 [T/C] 0.06  
rs28926182     18 13884685 [A/C] 0.00 MAF <0.05
rs79533878     18 13915537 [T/C] 0.11  
rs1893220     18 13916294 [T/G] 0.42  
rs1893219     18 13916387 [T/C] 0.46  
rs16148 NPY Neuropeptide Y 7 24282718 [A/G] 0.33  
rs5574     7 24289513 [A/G] 0.49  
rs4057797 NPY1R Neuropeptide Y receptor Y1 4 163323900 [A/T] 0.39  
rs9764     4 163324252 [A/G] 0.30  
rs4691075     4 163328332 [T/C] 0.08  
rs4691910     4 163328395 [T/C] 0.08  
rs4518200     4 163333269 [A/C] 0.08  
rs10213647 NPY2R Neuropeptide Y receptor Y2 4 155206005 [G/C] 0.34  
rs6857715     4 155208029 [A/G] 0.38  
rs2234759     4 155208404 [T/C] 0.20  
rs1047214     4 155214523 [A/G] 0.46  
rs4234955 NPY5R Neuropeptide Y receptor Y5 4 163339123 [A/G] 0.23  
rs4632602     4 163345976 [A/G] 0.11  
rs11100494     4 163349100 [T/G] 0.06  
rs6536721     4 163355744 [A/G] 0.31  
rs864082 NR3C1 Glucocorticoid receptor 5 143284373 [T/G] 0.00 MAF <0.05
rs10482672     5 143312967 [A/G] 0.12  
rs17339455     5 143330157 [A/G] 0.22  
rs7730946     5 143335623 [T/C] 0.00 MAF <0.05
rs2918419     5 143342787 [A/G] 0.15  
rs6877893     5 143347627 [T/C] 0.44  
rs6861962     5 143370735 [T/G] 0.00 MAF <0.05
rs1040288 NR3C2 Mineralocorticoid receptor 4 148126965 [C/G] 0.44  
rs11099680     4 148182094 [T/C] 0.28  
rs5522     4 148436322 [A/G] 0.14  
rs2070951     4 148436861 [G/C] 0.49  
rs4813625 OXT Oxytocin 20 3069073 [G/C] 0.50  
rs877172     20 3069243 [A/C] 0.30  
rs3761248     20 3069746 [T/C] 0.18  
rs2740210     20 3072608 [T/G] 0.34  
rs7632287 OXTR Oxytocin receptor 3 8749759 [T/C] 0.25  
rs237887     3 8755355 [T/C] 0.46  
rs4686301     3 8756899 [T/C] 0.27  
rs237899     3 8766828 [T/C] 0.33  
rs237902     3 8767497 [A/G] 0.30  
rs2228485     3 8768016 [A/G]   Call rate <90%
rs2270465     3 8775289 [C/G] 0.32  
rs28330 PITX1 Transcriptional regulator prolactin 5 135016843 [A/G] 0.40  
rs1131611     5 135029305 [T/G] 0.09  
rs3805663     5 135030509 [T/C] 0.36  
rs6596189     5 135032478 [A/G] 0.09  
rs941601 SERPINA6 Corticosteroid-binding globulin 14 94305203 [T/C] 0.14  
rs2228543     14 94306091 [T/C] 0.14  
rs1042394     14 94306166 [A/G] 0.29  
rs2228541     14 94309883 [A/C] 0.43  
rs1998056     14 94323157 [G/C] 0.42  
rs746530     14 94330955 [A/G] 0.32  

Bold values represent SNPs in moderate to strong LD (r2 > 0.70). Underline values represent SNPs in very high to complete LD (r2 > 0.98). dbSnp build = 150 assembly GRCh38.p10. Genes listed alphabetically by gene symbol and variants ordered by position within gene. Alleles displayed are from ‘+’ DNA strand.

Chr.: Chromosome; CRH: Corticotropin-releasing hormone; LD: Linkage disequilibrium; MAF: Minor allele frequency.