Table 1.
Species | Total Reads | Read Length (bp) | GC (%) | Reads after rRNA Removal | rRNA (%) | Bowtie Read Mapping (%) | Total Assembled Basesa | Mean Contig Lengtha | N50a | BUSCO Alignment (%) |
---|---|---|---|---|---|---|---|---|---|---|
P. pittieri | 67,826,440 | 100 | 47 | 62,306,774 | 8.05 | 98.6 | 45,638,979 | 1,024 | 1,937 | 94.2 |
P. contracta | 71,417,224 | 100 | 46 | 63,888,012 | 10.44 | 98.21 | 47,793,015 | 1,048 | 2,014 | 94.4 |
P. oerstedii | 74,046,768 | 100 | 46 | 72,726,108 | 1.69 | 98.42 | 48,667,883 | 1,108 | 2,157 | 94.2 |
P. tenuiloba | 67,265,786 | 100 | 44 | 66,971,196 | 0.39 | 98.6 | 48,862,335 | 1,150 | 2,265 | 92.2 |
P. auriculata | 62,271,730 | 100 | 45 | 62,093,554 | 0.23 | 98.31 | 47,326,508 | 1,045 | 2,050 | 94.3 |
P. biflora | 64,638,446 | 70–151 | 44 | 51,194,260 | 10.69 | 87.59 | 58,708,174 | 1,171 | 2,209 | 95.8 |
The statistic is based on single longest isoform per gene.