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. 2020 Sep 11;21:236. doi: 10.1186/s13059-020-02125-w

Table 1.

Average estimates of π^

Scenario Method πk(%)
qk = (0 0 0) (1 0 0) (0 1 0) (0 0 1) (1 1 0) (1 0 1) (0 1 1) (1 1 1)
1a Independent
True 99.720 0.070 0.070 0.070 0.020 0.020 0.020 0.010
Primo(t) 99.712 0.074 0.074 0.074 0.019 0.019 0.019 0.010
Primo(P) 99.749 0.065 0.065 0.065 0.016 0.016 0.016 0.007
Correlated
True 99.720 0.070 0.070 0.070 0.020 0.020 0.020 0.010
Primo(t) 99.712 0.073 0.073 0.073 0.019 0.019 0.019 0.011
Primo(P) 99.749 0.065 0.065 0.065 0.016 0.016 0.016 0.007
1b Independent
True 99.839 0.070 0.070 0.0007 0.020 0.0002 0.0002 0.0001
Primo(t) 99.832 0.073 0.073 0.0031 0.019 0.0002 0.0002 0.0001
Primo(P) 99.857 0.063 0.063 0.0014 0.016 0.0002 0.0001 0.0001
Correlated
True 99.839 0.070 0.070 0.0007 0.020 0.0002 0.0002 0.0001
Primo(t) 99.832 0.073 0.072 0.0029 0.019 0.0002 0.0002 0.0001
Primo(P) 99.857 0.063 0.063 0.0013 0.016 0.0002 0.0002 0.0001

Scenario 1a simulates sparse associations for J=3 traits. Scenario 1b simulates even sparser associations for the third trait