| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Software and Algorithms | ||
| netMHCpan 4.0 | Jurtz et al., 2017 | https://services.healthtech.dtu.dk/service.php?NetMHCpan-4 |
| MHCflurry | O'Donnell et al., 2018 | https://github.com/openvax/mhcflurry |
| NetChop 3.1 | Nielsen et al., 2005 | http://www.cbs.dtu.dk/services/NetChop/ |
| NetTepi | Trolle and Nielsen, 2014 | http://www.cbs.dtu.dk/services/NetTepi/ |
| Code for analysis pipeline | This paper | https://github.com/ComplexityBiosystems/hla-covid |
| Other | ||
| Sequence data, statistical analyses, and raw data | This paper | https://github.com/ComplexityBiosystems/hla-covid |
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