Table 1.
Locus name | Repeats | Na | Ne | Ho | He | I | HW | PIC |
---|---|---|---|---|---|---|---|---|
AVAG05a | (AG)10 | 17 | 3.84 | 0.54 | 0.74 | 1.73 | *** | 0.70 |
AVAG22a | (GA)15 | 23 | 9.59 | 0.71 | 0.90 | 2.59 | *** | 0.89 |
AVMIX01a | (AT)7,(AG)12 | 16 | 8.96 | 0.68 | 0.89 | 2.40 | *** | 0.88 |
ESTAVGA03b | (TC)20 | 14 | 8.32 | 0.78 | 0.88 | 2.31 | *** | 0.87 |
LMAV02 b | (AC)8(AG)14 | 20 | 6.81 | 0.54 | 0.85 | 2.30 | *** | 0.84 |
LMAV14 b | (AGAGGG)4(AG)3 | 19 | 7.94 | 0.46 | 0.87 | 2.33 | *** | 0.86 |
LMAV24 b | (AG)15 | 11 | 4.34 | 0.69 | 0.77 | 1.79 | * | 0.75 |
LMAV29 b | (CTT)8(CT)11 | 20 | 7.35 | 0.67 | 0.86 | 2.32 | NS | 0.85 |
LMAV31 b | (GA)21 | 17 | 7.02 | 0.82 | 0.86 | 2.20 | NS | 0.84 |
LMAV35 b | (GAA)5(GA)14 | 10 | 3.99 | 0.62 | 0.75 | 1.69 | * | 0.72 |
Mean | 16.70 | 6.81 | 0.65 | 0.84 | 2.17 | 0.82 | ||
Standard error | 1.30 | 0.66 | 0.04 | 0.02 | 0.10 | 0.02 |
*, ** and *** indicate significance of p value at p < 0.05, ≤0.01 and ≤ 0.001, respectively whereas NS indicates the non-significance of the p value after Bonferroni correction. a = from [24] b = from [25]
Na: Observed number of alleles
Ne: Effective number of alleles [26]
Ho: Observed heterozygosity
He: Nei’s [27] expected heterozygosity
I: Shannon information index [28]
HW: Hardy-Weinberg equilibrium test
PIC: Polymorphism information content