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. 2020 Sep 14;61(11):20. doi: 10.1167/iovs.61.11.20

Table 1.

Conditional IOPcc SNP Results and Replication

UK Biobank EPIC-Norfolk
SNP Pos Locus A1 Info Freq Beta SE P Value N Info Freq Beta SE P Value
rs2107482 3282064 MXRA5 G 0.986 0.316 −0.088 0.013 7.1 × 10−11 6243 0.962 0.323 −0.15 0.063 0.015
rs66819623 13954397 GPM6B C 0.975 0.572 −0.073 0.013 6.9 × 10−10 6092 0.956 0.579 −0.13 0.061 0.026
rs12558081 43939978 NDP/EFHC2 A 0.994 0.697 −0.087 0.013 4.9 × 10−11 6323 0.966 0.610 −0.15 0.064 0.023

‘SNP’ is the variant rsid, ‘Pos’ is the base pair position (Human genome build 37), ‘Locus’ is the nearest gene/s to the SNP, ‘A1’ is the reference allele, ‘Info’ is a imputation quality score (scale 0-1), ‘Freq’ is the A1 allele frequency in each cohort for this analysis, ‘Beta’ and ‘SE’ are the linear regression coefficients and respective standard errors for the A1 allele in the respective cohort, ‘P’ is the respective association P value in each cohort, ‘N’ is the sample size for the respective allele in the EPIC-Norfolk cohort.