Table 2.
All possible combinations of groups used for various gHBfix settings and their abbreviations. See Table 1 for atoms involved within each group.
| gHBfix name | Donors | Acceptors |
|---|---|---|
| 2-OH…nbO | 2’-OH (sugar) | nbO (phosphate) |
| 2-OH…bO | 2’-OH (sugar) | bO (phosphate) |
| 2-OH…O2 | 2’-OH (sugar) | O2’ (sugar) |
| 2-OH…O4 | 2’-OH (sugar) | O4’ (sugar) |
| 2-OH…N | 2’-OH (sugar) | N (base) |
| 2-OH…O | 2’-OH (sugar) | O (base) |
| NH…N | NH (base) | N (base) |
| NH…O | NH (base) | O (base) |
| NH…O2 | NH (base) | O2’ (sugar) |
| NH…O4a | NH (base) | O4’ (sugar) |
| NH…bOa | NH (base) | bO (phosphate) |
| NH…nbOa | NH (base) | nbO (phosphate) |
Not tested in this work.