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. 2020 Oct;26(10):1360–1379. doi: 10.1261/rna.075507.120

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© 2020 Martínez-Fernández et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society

This article is distributed exclusively by the RNA Society for the first 12 months after the full-issue publication date (see http://rnajournal.cshlp.org/site/misc/terms.xhtml). After 12 months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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FIGURE 7. — Global transcriptomic expression analysis of a bud27Δ mutant and rapamycin-treated wild-type cells. (A) Venn diagrams representing the differentially expressed genes (more than twofold) in the bud27Δ versus wild-type cells and the rapamycin-treated versus untreated wild-type cells. Cells were grown in YPD at 30°C. Rapamycin was added at the 400 ng/mL concentration. P-values are represented for each analyzed data set. (B) A correlation scatterplot showing the relation between the RNA-seq data of the bud27Δ versus wild-type cells and the rapamycin-treated versus untreated wild-type cells. The Spearman correlation coefficient is indicated. The color scale indicates the density of overlapping genes (from colder to warmer colors as density increases). (C) A similar correlation analysis as in B depicting the correlation coefficients of the RP, RiBi, and the other protein-coding genes, separately. Tendency lines are adjusted to the specific gene groups indicated by the color scheme.