Table 1.
Biomarker table header descriptions and column content.
| Header | Column Content |
|---|---|
| literature_evidence | PMID (PubMed ID) or DOI (DOI number) |
| biomarker_substance_accession | UPKB (UniProtKB/Swiss-Prot ac) or PCCID (PubChem Compound ID) or CO (Cell Ontology ID) or PRO (Protein Ontology ID) or DO (Disease Ontology ID) |
| biomarker_name | Common name or UniProtKB protein name and gene symbol or short name in parenthesis |
| measured_biomarker | increased/decreased level or expression or counts or ratio |
| specimen_type | Uberon name (Uberon ID) |
| BEST_biomarker_type | monitoring; diagnostic; prognostic; predictive; risk/susceptibility; safety; pharmacodynamic/response |
| drug | Drug name (DrugBank ID) |
| biomarker_description | Free text from paper (preferably unedited) |
| curator name | First and Last name |
| curator_ORCID | ORCID |
| curator_notes | Free text from curator |
| reviewer_initial | Name/Initial: Free text from reviewer |