REAGENT or RESOURCE	SOURCE	IDENTIFIER
Biological Samples
Nasopharyngeal swab specimens collected and analyzed for routine clinical care from participants at three NewYork-Presbyterian hospitals	Clinical Microbiology Laboratories of NewYork-Presbyterian Hospital	N/A
Critical Commercial Assays
cobas SARS-CoV-2 RT-PCR Assay	Roche Molecular Systems, Inc.	Platform: cobas 6800
Xpert Xpress SARS-CoV-2 RT-PCR Assay	Cepheid, Inc.	Platform: GeneXpert Infinity
Software and Algorithms
STATA, version 15.1	StataCorp	Stata/IC 15.1
Other
REDCap database of clinical data of patients presenting to affiliated hospitals with COVID-19 under a Weill Cornell Medicine (WCM) Institutional Review Board (IRB)-approved protocol	Harris et al., 2009 Goyal et al., 2020	WCM IRB #20-03021681