Table 2.

Distinct OTUs included in the dairy cow core milk microbiome (100% of the samples).

Phylum	Class	Order	Family	Genus	Avg counts
Actinobacteria	Actinobacteria	Actinomycetales	Corynebacteriaceae	Corynebacterium	347.45
Actinobacteria	Actinobacteria	Actinomycetales	Propionibacteriaceae	Propionibacterium	1201.24
Firmicutes	Bacilli	Bacillales	Staphylococcaceae	Staphylococcus	166.46
Firmicutes	Bacilli	Lactobacillales	Lactobacillaceae	Lactobacillus	277.52
Firmicutes	Bacilli	Lactobacillales	Streptococcaceae	Lactococcus	28.40
Firmicutes	Bacilli	Lactobacillales	Streptococcaceae	Streptococcus	1901.83
Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Bradyrhizobium	621.75
Proteobacteria	Betaproteobacteria	Burkholderiales	Alcaligenaceae	Achromobacter	46.87
Proteobacteria	Gammaproteobacteria	Pseudomonadales	Moraxellaceae	Enhydrobacter	1373.12
Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Pseudomonas	3280.24
Proteobacteria	Betaproteobacteria	Burkholderiales	Alcaligenaceae		2702.20
Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae		220.06
Proteobacteria	Betaproteobacteria	Burkholderiales			10240.48