Table 4.
Alpha diversity indices by timepoint and treatment (p-value from linear mixed model).
Indices | Dry-off | Calving | 5 DIM | Cephal. | Cloxac. | t-sealant | Controls | Timepoint | Treatment | Treat:time |
---|---|---|---|---|---|---|---|---|---|---|
Chao1 | 1557.57 | 982.90 | 985.66 | 1062.76 | 1040.18 | 1366.56 | 1232.00 | 5.51e-06 | 6.36e-02 | 4.18e-01 |
Fisher alpha | 218.75 | 109.21 | 107.07 | 126.70 | 121.98 | 178.70 | 152.66 | 6.91e-07 | 7.06e-02 | 3.62e-01 |
Observed otus | 1251.65 | 726.20 | 741.85 | 804.93 | 784.80 | 1080.73 | 955.80 | 5.85e-06 | 6.41e-02 | 3.10e-01 |
Shannon | 6.62 | 5.32 | 5.45 | 5.45 | 5.47 | 6.24 | 6.04 | 2.94e-04 | 8.80e-02 | 5.67e-01 |
Simpson | 0.96 | 0.92 | 0.93 | 0.92 | 0.93 | 0.95 | 0.95 | 3.23e-02 | 3.03e-01 | 4.55e-01 |
Equitability | 0.65 | 0.56 | 0.57 | 0.57 | 0.57 | 0.62 | 0.61 | 2.33e-03 | 1.14e-01 | 5.46e-01 |
Simpson e | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 3.81e-01 | 3.33e-01 | 7.28e-01 |
ACE | 1536.77 | 954.79 | 957.43 | 1034.17 | 1011.04 | 1348.66 | 1204.79 | 4.74e-06 | 5.43e-02 | 3.73e-01 |