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. 2020 Sep 16;21:641. doi: 10.1186/s12864-020-07060-5

Table 1.

Genome coverage and average depth of the MGTV strain Yunnan2016

Data Tick Reference Coverage Depth
SRR4116826

Amblyomma.

testudinarium

Xinjiang2016 86.47% 46.52
Yunnan2016 97.37% 91.11

SRR8439389

SRR8439390

Dermacentor.

nuttalli

Yunnan2016 18.40% 2.58
SRR8432408 D. niveus Yunnan2016 18.62% 2.91
SRR8432409 Yunnan2016 20.72% 2.94
SRR811197093 D. silvarum Yunnan2016 24.38% 10.31
SRR811197094 Yunnan2016 8.11% 4.22

“Data” (the first column) was aligned to the reference genome (the 3rd column) to obtain the information on the fourth and fifth columns. “Data” was unique for each run of sRNA-seq data in the NCBI SRA database. The virus strain Yunnan2016 (GenBank: MT080097, MT080098, MT080099 and MT080100) was detected in the present study. The reference genome of the MGTV strain Xinjiang2016 (GenBank: MK174251, MK174244, MK174230 and MK174237) was used to report Yunnan2016. “Coverage” and “Depth” indicated the genome coverage and average depth, respectively (Refer to Methods)