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. 2020 Sep 2;10:1603. doi: 10.3389/fonc.2020.01603

TABLE 1.

Detected mutations in the 27 patients of the FCCTX group.

Gender Age Location Gene Variant Variants type Variant impact
Female 45 Rectum ATM NC_000011.10:g.108257512_108257513CT(p. Leu762fs) frameshift Likely pathogenic
Male 58 Rectum BRCA1 NC_000017.11:g.43094020C>T(p. Arg504His) SNV Benign
Male 60 Sigmoid (left) POLE NC_000012.11:g.133219820A>G(p. Val1514Ala) SNV VUS
Male 72 Descending colon (left) RAD50 NC_000005.10:g.132588846A>G(p. Gln404Arg) SNV VUS
Female 60 Ascending colon (right) ATM NC_000011.10:g.108250816C>T(p. Arg451Cys) SNV VUS
Male 68 Ascending colon (right) BRCA2 NC_000013.11:g.32356461T>C(p. Ile2490Thr) SNV Benign
Male 75 Ascending colon (right) POLD1 NC_000019.9:g.50905089T>C(p. Val124Ala) SNV VUS
POLE NC_000012.11:g.133202349G>A(p. Ala2180Val) SNV VUS
POLE NC_000012.11:g.133237641C>T(p. Ala992Thr) SNV VUS
Female 42 Ascending colon (right) ATR NC_000003.11:g.142172064G>C(p. Thr2556Ser) SNV VUS
Male 47 Rectum ATR NC_000003.11:g.142281919G>A(p. Arg109Trp) SNV VUS
POLD1 NC_000019.10:g.50402703G>A(p. Arg311His) SNV VUS
Male 76 Descending colon (left) BRIP1 NC_000017.10:g.59763416T>C(p. Ile896Val) SNV VUS
RAD50 NC_000005.10:g.132588846A>G(p. Gln404Arg) SNV VUS
Female 45 Sigmoid (left) BRCA2 NC_000013.10:g.32910678T>C(p. Ile729Thr) SNV VUS
Female 68 Ascending colon (right), sigmoid (left) BARD1 NC_000002.11:g.215610562C>T(p. Arg565His) SNV VUS
BRCA2 NC_000013.10:g.32913723G>T(p. Ser1744Ile) SNV VUS
Female 43 Ascending colon (right) BLM NC_000015.10:g.90769546A>G(p. Lys839Glu) SNV VUS
BRCA1 NC_000017.11:g.43106514G>A(p. Leu52Phe) SNV VUS
Male 61 Rectum APC NC_000005.9:g.112173705G>A(p. Arg805Gln) SNV VUS
Male 73 Rectum MUTYH NC_000001.10:g.45797972G>A(p. Gln267Ter) Stop gained Pathogenic?
Male 51 Rectum MLH3 NC_000014.8:g.75515169_75515171del(p. Ile397del) Deletion VUS
Male 53 Sigmoid (left), rectum BUB1B NC_000015.9:g.40504755G>A(p. Arg814His) SNV VUS
Female 44 Rectum MUTYH NC_000001.10:g.45797972G>A(p. Gln267Ter) Stop gained Pathogenic
Male 72 Rectum GALNT12 NC_000003.11:g.37089020C>T(p. Pro240Leu) SNV VUS
Male 37 Ascending colon (right) NTRK1 NC_000005.9:g.112173705G>A(p. Arg780Gln) SNV VUS
Male 70 Ascending colon (right) PTCH1 NC_000009.12:g.95467197T>C(p. Ser761Gly) SNV VUS
Female 36 Rectum CDH1 NC_000016.9:g.68846047A>G(p. Thr340Ala) SNV Benign
Male 45 Rectum CDH1 NC_000016.9:g.68856080C>G(p. Leu630Val) SNV Benign
Male 47 Rectum ATR NC_000003.11:g.142281919G>A(p. Arg109Trp) SNV VUS
Female 43 Ascending colon (right) ALK NC_000002.11:g.29448339C>T(p. Gly1054Ser) SNV VUS
CHEK2 NC_000022.10:g.29107934C>T(p. Ser252Asn) SNV VUS
Male 48 Ascending colon (right) MLH3 NC_000014.8:g.75515169_75515171del(p. Ile397del) Deletion VUS
Male 50 Ascending colon (right) AXIN2 NC_000017.10:g.63537574G>A(p. Pro353Leu) SNV VUS

SNV, single nucleotide variant; VUS, variants of uncertain significance; FCCTX, familial colorectal cancer type X.