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. 2020 Sep 16;7:309. doi: 10.1038/s41597-020-00652-6

Online-only Table 1.

Variants identified in human population, mappable on the cryo-EM structure.

#N Variation Haddock Score vdW (a.u.) Elec (a.u.) Desol (a.u.) BSA (Å2)
0 WT −89.9 ± 5.2 −54.7 ± 2.4 −184.5 ± 9.3 1.7 ± 4 1729 ± 34.6
1 E23K −98 ± 11.1 −54.8 ± 3.3 −188.6 ± 24.2 −5.5 ± 8.8 1740.2 ± 62.6
2 K26R −108.9 ± 5.1 −57.8 ± 5.6 −198.7 ± 10.8 −11.4 ± 7.9 1762.8 ± 43.4
3 E37K −91.1 ± 5.2 −55.1 ± 2.2 −184.4 ± 17.5 0.9 ± 6.4 1737.9 ± 26.6
4 F40L −99.5 ± 9.5 −57.2 ± 3.2 −187.5 ± 20.7 −4.8 ± 7.2 1763.7 ± 66.2
5 S47P −99.4 ± 3.5 −53.8 ± 3.3 −187.5 ± 14.3 −8.1 ± 3.9 1729.1 ± 41.3
6 N58D −106.9 ± 6.2 −56 ± 3.6 −189.7 ± 39.9 −13.1 ± 6.2 1724.2 ± 16.8
7 N58H −92 ± 8.1 −52.1 ± 4 −209.1 ± 10.1 2 ± 4.4 1739.9 ± 39
8 N64K −103.4 ± 2.1 −53.9 ± 3.1 −195.1 ± 7.6 −10.5 ± 2.5 1746.1 ± 32.4
9 M82I −90.5 ± 6 −53.6 ± 3.4 −188.2 ± 19.5 0.8 ± 6.3 1708.7 ± 19.4
10 Q86R −93.2 ± 0.7 −55 ± 1.9 −198.7 ± 9.8 1.5 ± 2.5 1772.1 ± 23.6
11 A99T −110.3 ± 7.5 −58.6 ± 3.1 −183.7 ± 16.5 −14.9 ± 4.3 1799.9 ± 28.7
12 N103H −96.2 ± 1.5 −55.8 ± 2.3 −201.9 ± 15.5 0 ± 6 1713.3 ± 43.9
13 V107A −94.9 ± 2.6 −54.6 ± 2.6 −204.8 ± 9.1 0.6 ± 3.8 1736.6 ± 18
14 R115Q −99.1 ± 4.9 −56.9 ± 1.5 −205.7 ± 9.8 −1.1 ± 4.1 1766.2 ± 19.5
15 R115W −100.1 ± 8 −54.9 ± 1.2 −192.3 ± 22.1 −6.7 ± 6.8 1742.6 ± 36
16 P138L −108.3 ± 10.9 −54.8 ± 1.5 −217.4 ± 13.7 −10.1 ± 12.1 1735.6 ± 5.4
17 C141Y −98.6 ± 2.9 −55.5 ± 1.9 −176.1 ± 10.7 −7.8 ± 3.5 1732.5 ± 35.8
18 N154K −89.8 ± 3.5 −53.8 ± 0.7 −179.1 ± 12.2 −0.2 ± 6 1707 ± 13.2
19 N159S −100 ± 9.5 −54.3 ± 2.1 −208.4 ± 15.2 −4.1 ± 7 1751.3 ± 50
20 E171D −97.8 ± 4.2 −54.9 ± 0.9 −210.7 ± 19.4 −0.8 ± 4.9 1733.5 ± 56.3
21 V184A −101.6 ± 7.4 −54.8 ± 2.9 −200.5 ± 10 −6.7 ± 10 1741.4 ± 45.1
22 A191P −98.9 ± 3.5 −56.2 ± 2.2 −193.9 ± 9.5 −3.9 ± 5.2 1734.8 ± 68.5
23 H195Y −89.4 ± 2.5 −56.6 ± 1 −156.2 ± 21.9 −1.5 ± 4.7 1748.7 ± 49.6
24 D206G −97.5 ± 2.8 −56.9 ± 3.5 −191.4 ± 10.9 −2.3 ± 4.4 1745 ± 60.9
25 G211R −103 ± 2.5 −58.5 ± 3.8 −204.2 ± 18.1 −3.6 ± 7 1816.3 ± 18
26 D216E −95.9 ± 5.4 −55.2 ± 1.2 −174.3 ± 22.7 −5.8 ± 5.8 1731.3 ± 20.4
27 Y217C −89.8 ± 2.9 −52.8 ± 2.2 −202.8 ± 6.2 3.6 ± 3.3 1729.9 ± 16.8
28 R219C −101.5 ± 6 −52.6 ± 1.8 −215.2 ± 14.8 −5.8 ± 2.2 1748.4 ± 21.3
29 R219H −98 ± 3.5 −56.4 ± 2.4 −207.1 ± 23.4 −0.2 ± 3.6 1759.8 ± 84
30 G220S −99 ± 3.4 −56.6 ± 1.6 −191 ± 11.6 −4.3 ± 3.5 1771.6 ± 26.9
31 P235R −97.7 ± 4 −54 ± 1.2 −187.3 ± 11.3 −6.3 ± 5.1 1685.9 ± 23.8
32 A251T −97.6 ± 1.8 −55.8 ± 1.5 −209.1 ± 5.5 0 ± 0.9 1757.5 ± 9.2
33 Y252C −94.5 ± 6.9 −52.8 ± 3.2 −179.7 ± 19.2 −5.8 ± 8.1 1711.6 ± 44.9
34 S257N −93 ± 2.2 −56.6 ± 3.6 −186 ± 18.5 0.8 ± 1.5 1734.3 ± 27.6
35 P263S −92.7 ± 6.3 −56 ± 2.7 −172.7 ± 31 −2.2 ± 4.7 1753.6 ± 37
36 M270V −97.1 ± 1.7 −56 ± 2.1 −188 ± 5.5 −3.6 ± 1.6 1762.9 ± 44.2
37 V283F −88.6 ± 2.4 −54.6 ± 4.8 −182 ± 12.9 2.4 ± 6.9 1739.8 ± 32.8
38 K288T −92.1 ± 2.6 −56.2 ± 2.4 −182.3 ± 14.5 0.5 ± 2.4 1719.6 ± 30.4
39 I291K −93.8 ± 2.7 −53.5 ± 2.9 −192.4 ± 17 −1.8 ± 4.2 1732 ± 15.6
40 D292V −92.1 ± 1.3 −56.2 ± 2.1 −178.5 ± 19.3 −0.2 ± 1.7 1715.7 ± 23.4
41 D295G −96.7 ± 9 −57.2 ± 2.2 −166.4 ± 30.9 −6.2 ± 7.5 1759 ± 30.2
42 M297L −98.9 ± 8 −56.6 ± 2.2 −173.1 ± 5.4 −7.7 ± 7.7 1699.3 ± 7
43 M297I −83.8 ± 7 −55.4 ± 1.2 −195.9 ± 9.9 10.8 ± 7.9 1715.3 ± 9.1
44 V298A −87.6 ± 4.6 −55.9 ± 3 −180.4 ± 34.9 4.4 ± 8.2 1714.8 ± 47.3
45 D299G −98 ± 2.4 −53.7 ± 2.4 −206.3 ± 17.3 −3 ± 3.3 1739.8 ± 44.7
46 E312K −95.7 ± 2.7 −57.4 ± 3.1 −186 ± 18.4 −1.1 ± 1.8 1794.4 ± 28.3
47 G326E −103.3 ± 4.8 −58.1 ± 1.1 −216.1 ± 10.3 −2 ± 6.2 1838.4 ± 42.8
48 E329G −91.2 ± 4.5 −56.8 ± 4.7 −175.5 ± 11.2 0.7 ± 5.5 1721.3 ± 22.3
49 M332L −98.1 ± 1.1 −54.4 ± 2.7 −194.6 ± 4.2 −4.8 ± 1.5 1760.8 ± 35.6
50 T334M −93.9 ± 5 −54.6 ± 2.4 −195.6 ± 19.2 −0.2 ± 4.7 1761 ± 65.1
51 N338S −99.1 ± 5.7 −56.8 ± 3.6 −180.1 ± 3.8 −6.3 ± 8.3 1751.2 ± 36.4
52 K341R −95.6 ± 5.9 −55 ± 0.8 −210.1 ± 13.5 1.4 ± 4.6 1760.2 ± 23.4
53 G352V −108.6 ± 4.6 −58.3 ± 2.6 −197.8 ± 16.1 −10.8 ± 4.7 1792.5 ± 38.4
54 D368N −102.1 ± 2.3 −56.1 ± 5 −189.2 ± 5.3 −8.1 ± 3.9 1721.9 ± 43.3
55 E375D −92.8 ± 2.2 −51.8 ± 2.7 −201.4 ± 19.4 −0.7 ± 4.3 1721.6 ± 30.2
56 M376T −97.7 ± 2.8 −54.2 ± 3.1 −178.5 ± 22.3 −7.8 ± 3.2 1701.4 ± 45.8
57 G377V −97.5 ± 4.2 −55.2 ± 2.8 −200.2 ± 18.3 −2.3 ± 5.3 1755.8 ± 35.5
58 H378R −96.8 ± 4.7 −54.1 ± 3 −187.8 ± 14.3 −5.1 ± 6.4 1715.6 ± 8.4
59 M383T −96.5 ± 5.4 −55.5 ± 2.1 −185.8 ± 7.6 −3.9 ± 6.6 1697.7 ± 25.1
60 Q388L −106.1 ± 2.7 −56.6 ± 2.6 −191.2 ± 23.1 −11.2 ± 3.9 1753.2 ± 21.4
61 P389H −90.4 ± 5 −54.5 ± 1.4 −184.2 ± 4.8 0.9 ± 5.1 1753.4 ± 57.2
62 N397D −98.7 ± 5.9 −55.6 ± 1 −213.1 ± 26.9 −0.5 ± 6.7 1712.5 ± 58.7
63 F400L −94.7 ± 5.4 −55.3 ± 2.5 −194.2 ± 23.5 −0.6 ± 8.1 1747.9 ± 10.7
64 L410V −102.3 ± 5.9 −56.5 ± 2.2 −191.2 ± 3.1 −7.6 ± 7 1766.1 ± 14.7
65 L418S −97.5 ± 5.5 −55 ± 4 −194.5 ± 18.4 −3.6 ± 10.5 1740.7 ± 55.9
66 S420C −97.6 ± 3.9 −54.9 ± 2.4 −212.7 ± 8.8 −0.2 ± 4.9 1760.2 ± 16.6
67 S420P −97.6 ± 7.9 −54.7 ± 3.8 −220.5 ± 8.1 1.2 ± 5.7 1751.4 ± 25.6
68 D427Y −101 ± 4.2 −58 ± 2.2 −185.8 ± 15.8 −5.9 ± 4.9 1739.2 ± 54
69 N437S −87.6 ± 3.5 −56.5 ± 3.1 −182.3 ± 15.7 5.3 ± 7.5 1738.5 ± 30.5
70 T445M −99 ± 7.2 −55.8 ± 3.4 −198.1 ± 17.5 −3.6 ± 8.7 1756.9 ± 37.4
71 I446M −91.8 ± 8.2 −54.4 ± 1.9 −189.4 ± 18.6 0.4 ± 12.6 1744.2 ± 102.6
72 V447F −101.4 ± 7.7 −59.2 ± 4 −205.5 ± 21.3 −1.1 ± 3 1772.5 ± 52.4
73 G448E −97 ± 3.1 −53.9 ± 3.3 −209.2 ± 20.8 −1.3 ± 4.7 1774.8 ± 62.9
74 M462I −95.9 ± 5.1 −55.4 ± 0.8 −174.4 ± 23.8 −5.6 ± 7 1733 ± 39.7
75 E467K −92.4 ± 1.6 −56 ± 0.8 −193.2 ± 10.5 2.2 ± 2.6 1757.3 ± 31.1
76 I468V −94 ± 1.9 −55 ± 2.9 −182.3 ± 18.9 −2.5 ± 3.6 1705.7 ± 31.9
77 M480V −96 ± 1.9 −55.1 ± 1.3 −199.5 ± 30.8 −1 ± 3.9 1730.8 ± 29.9
78 R482Q −98.3 ± 1.4 −51.6 ± 2.6 −191.6 ± 16.8 −8.4 ± 6.8 1739.1 ± 46.2
79 E483D −104.6 ± 6.6 −57.4 ± 2.4 −185.2 ± 25 −10.1 ± 8.3 1777.7 ± 24
80 P492S −104.7 ± 2.3 −58 ± 4 −189.3 ± 10.3 −8.8 ± 2.6 1781.4 ± 34.9
81 D494V −99.9 ± 2.6 −55.4 ± 3.5 −207.2 ± 13.2 −3.1 ± 8.1 1750.6 ± 15.8
82 A501T −97.3 ± 2.1 −53.3 ± 1.4 −171.8 ± 25.3 −9.7 ± 4.8 1709.1 ± 23.6
83 F504L −99.8 ± 5.8 −52 ± 1 −202.6 ± 4.9 −7.2 ± 5.8 1760.3 ± 28.6
84 F504I −91.9 ± 1.5 −54.4 ± 4.3 −189.8 ± 6.5 0.5 ± 4.4 1726.4 ± 10.9
85 V506A −89.8 ± 3.4 −54.6 ± 1.2 −184.2 ± 4.4 1.7 ± 4.6 1723.8 ± 22.2
86 S511P −92.3 ± 1.4 −54 ± 2.7 −189.7 ± 31.2 −0.4 ± 9.6 1731.3 ± 46
87 R514G −103 ± 3.9 −54.1 ± 2.2 −196.2 ± 8 −9.7 ± 5.3 1709.6 ± 24
88 F523L −97.8 ± 5.7 −55.3 ± 2.4 −210.5 ± 10.6 −0.4 ± 4.8 1749.5 ± 60
89 A532T −103 ± 3.9 −55.9 ± 1.8 −201.9 ± 8.1 −6.7 ± 3.5 1765.8 ± 40.5
90 K541I −104.3 ± 8.7 −55 ± 3.5 −189.7 ± 34.8 −11.4 ± 5.1 1722.1 ± 41
91 N546D −91.1 ± 3.1 −56.7 ± 2.3 −190.8 ± 21.4 3.8 ± 5.7 1744.5 ± 18.8
92 S547C −93.9 ± 6.1 −52.9 ± 3.9 −197.2 ± 13.4 −1.6 ± 4.6 1743.6 ± 40.8
93 K553T −97.2 ± 4.9 −57.4 ± 2.3 −205.9 ± 19.4 1.4 ± 4.7 1808.1 ± 36.6
94 R559S −96.7 ± 0.7 −56.5 ± 0.9 −195.8 ± 7.3 −1 ± 2 1764.8 ± 57.3
95 S563L −101.2 ± 5.6 −56.6 ± 3.2 −196.5 ± 18.8 −5.4 ± 6.5 1735.3 ± 46.4
96 L570S −94.4 ± 5.5 −54.6 ± 3.7 −177.8 ± 18.2 −4.3 ± 1.9 1698.6 ± 19.2
97 R582S −108.9 ± 4.7 −57.8 ± 1.2 −204.4 ± 10.2 −10.2 ± 3.2 1789.1 ± 34.8
98 R582K −90.5 ± 6.1 −58.4 ± 2.6 −174.3 ± 3.8 2.8 ± 4.2 1734.7 ± 4.4
99 N586Y −94.8 ± 3.3 −53.5 ± 2.6 −191.7 ± 6.8 −3 ± 4.2 1745.2 ± 32.4
100 T593N −95.5 ± 2.6 −55.9 ± 0.8 −199.9 ± 19.9 0.3 ± 4.4 1742.9 ± 42.5
101 L595V −93.1 ± 1.6 −57.4 ± 2.9 −204.9 ± 9.3 5.3 ± 4.5 1725.9 ± 55.1
102 D597E −96 ± 4.4 −53 ± 4.4 −184 ± 16.1 −6.2 ± 7.7 1742.6 ± 73.1
103 S607G −92.8 ± 1.5 −52.4 ± 3.1 −185.1 ± 8.5 −3.4 ± 1.7 1708.5 ± 46.4
104 D609N −95 ± 1.9 −56.4 ± 1.2 −183.9 ± 12.6 −1.8 ± 3.8 1753.1 ± 33.6
105 A614S −93.5 ± 2.3 −57 ± 2.4 −194.9 ± 28.1 2.4 ± 5 1777 ± 55.5
106 A614T −103.5 ± 1.1 −53.9 ± 1.7 −195.1 ± 20.1 −10.6 ± 3.5 1746.8 ± 15.8
107 N638S −101.8 ± 3.9 −53.8 ± 3.2 −197.3 ± 17.4 −8.5 ± 5.4 1748.8 ± 27.9
108 Y654S −99.2 ± 6.8 −56.4 ± 2.5 −203.5 ± 10.8 −2.2 ± 5 1707.9 ± 14.3
109 E667V −91.4 ± 3.6 −53.7 ± 1.6 −174.2 ± 23.1 −2.9 ± 7.2 1761.9 ± 30.6
110 V670A −94.2 ± 4.8 −57.9 ± 1.5 −176.7 ± 16.3 −0.9 ± 6.4 1741 ± 48.6
111 R671Q −99.9 ± 5.6 −54.9 ± 2.5 −170.7 ± 16.2 −10.9 ± 5.9 1711 ± 41.7
112 R671P −98.8 ± 3.5 −52.7 ± 4.6 −192.6 ± 21.7 −7.5 ± 4.1 1728.5 ± 63.4
113 V672L −99.4 ± 3.4 −54.1 ± 2.2 −182.4 ± 17.6 −8.8 ± 3.3 1737.4 ± 60.6
114 V672A −94.7 ± 1.7 −55.9 ± 2.3 −195.2 ± 10.2 0.2 ± 5.3 1767.8 ± 41
115 A673G −99.5 ± 10.9 −56.1 ± 2.2 −178.5 ± 47 −7.7 ± 9 1757.9 ± 58.2
116 K689E −99.4 ± 4.3 −53.3 ± 1.3 −191.1 ± 23 −7.9 ± 4 1731 ± 50.3
117 S692P −97.4 ± 7.3 −52.8 ± 2.5 −211.8 ± 17 −2.2 ± 4.1 1743.1 ± 41
118 D693H −96.9 ± 7.1 −55 ± 2.2 −194 ± 23.1 −3.1 ± 5.9 1737.1 ± 27.7
119 P696T −97.5 ± 7.1 −53.2 ± 1.6 −204.5 ± 7 −3.4 ± 6.1 1724.8 ± 32.5
120 R697G −95.6 ± 3.2 −54.7 ± 2.4 −191.7 ± 11.3 −2.6 ± 1.5 1729.6 ± 26.5
121 V700I −92.3 ± 5.1 −54 ± 0.9 −178.6 ± 11.1 −2.5 ± 3 1704.5 ± 45.7
122 R705S −99.1 ± 4.7 −54.3 ± 4.8 −193.1 ± 14.2 −6.2 ± 7.8 1708.9 ± 23.1
123 R708W −101.4 ± 4.9 −53.9 ± 4 −196.2 ± 11.3 −8.2 ± 3 1810.3 ± 38.6
124 S709R −97 ± 4.1 −57.4 ± 3.1 −203.7 ± 2.9 1.2 ± 3.8 1763.4 ± 22.8
125 R710C −98.5 ± 1.8 −55.8 ± 2.4 −202.2 ± 15.2 −2.3 ± 5.7 1791.5 ± 46.3
126 R710H −95.8 ± 5.6 −53.5 ± 2.2 −172.2 ± 8.9 −7.9 ± 4.2 1694.5 ± 24
127 R716H −105.2 ± 4.5 −54.1 ± 3 −195.6 ± 24.9 −11.9 ± 1.3 1761.4 ± 64.8
128 R716C −96.1 ± 4.4 −56 ± 1.2 −177.5 ± 12.1 −4.6 ± 2.3 1725.1 ± 19.9
129 N720D −97 ± 1.8 −53.7 ± 2.2 −189.3 ± 5 −5.5 ± 2.7 1743.2 ± 31.8
130 N720S −102.2 ± 6.3 −54.5 ± 3.4 −196 ± 22.5 −8.5 ± 12.9 1783.9 ± 45
131 L722P −99.9 ± 4.8 −55.6 ± 4.1 −175.3 ± 27.9 −9.2 ± 5.6 1724.6 ± 18.3
132 P729L −88.6 ± 3.2 −57.5 ± 2.7 −186 ± 18.9 6.2 ± 6.3 1749.2 ± 45.5
133 L731F −94.2 ± 1.7 −55.3 ± 3.8 −179.1 ± 19.1 −3.2 ± 1.8 1708.6 ± 47.4
134 S740F −93.5 ± 4.1 −54.7 ± 2.3 −191.6 ± 20.5 −0.5 ± 6.3 1750.8 ± 25.1
135 S740P −96.7 ± 4.5 −52.6 ± 5.6 −201 ± 12.8 −3.9 ± 6.4 1759 ± 49
136 I741V −99.4 ± 11.5 −55.7 ± 3.7 −210.7 ± 6.9 −1.6 ± 10 1724.8 ± 73.3
137 V745I −89.2 ± 2.1 −53.9 ± 2.7 −180.1 ± 6.3 0.7 ± 3.5 1710.7 ± 64.2
138 V755A −101.6 ± 2.1 −56.2 ± 2.1 −188.1 ± 14.8 −7.8 ± 4.3 1739.8 ± 34.9
139 D767H −90.2 ± 9.3 −57.2 ± 3.1 −193.8 ± 10.7 5.8 ± 7.3 1734.3 ± 31.7
140 R768W −103 ± 5.4 −57.2 ± 2.5 −174 ± 40 −11 ± 7.8 1766.6 ± 28.5

Table includes energetic calculations with HADDOCK. vdW–van der Waals interaction score; Elec–electrostatic interaction score; Desol–desolvation score; BSA–buried surface area; a.u.–arbitrary units of energy. Bold entries include variants within 10 Å of the ACE2-S protein interface.