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. 2020 Sep 16;11:4658. doi: 10.1038/s41467-020-18434-4

Table 1.

Metagenome information and results of DMSP-related gene searches in the metagenome data.

Samples Depth (m) Estimated % of cell with
DMSP biosynthesis DMSP cleavage DMSP demethylation
DsyB MmtN DSYB TpMMT DddP DddQ DddL DddD DddK DddW DddY Alma1 DmdA
FL0a 0 0.78 ± 0.16 0.40 ± 0.18 0 0 6.48 ± 0.24 0.96 ± 0.14 0.64 ± 0.06 0.35 ± 0.16 0.26 ± 0.07 0.00 0.01c 0 35.73 ± 7.96
PA0a 0 0.89 ± 0.17 0.23 ± 0.01 0 0 6.05 ± 1.43 0.24 ± 0.17 1.29 ± 0.56 0.33 ± 0.05 0.29c 0.09c 0.00 0 12.73 ± 0.89
FL2000b 2000 0.43 ± 0.15 0.47 ± 0.16 0 0 5.34 ± 0.20 3.55 ± 0.63 1.09 ± 0.14 0.10 ± 0.06 0.00 0.00 0.13 ± 0.06 0 26.66 ± 7.17
FL4000a 4000 3.28 ± 1.88 0.33 ± 0.12 0 0 2.74 ± 0.87 1.79 ± 0.64 3.03 ± 0.41 0.24 ± 0.04 0.00 0.35c 0.12c 0 6.01 ± 0.99
PA4000a 4000 2.18 ± 0.02 0.65 ± 0.55 0 0 5.29 ± 1.85 0.35 ± 0.14 4.61 ± 1.91 0.34 ± 0.17 0.00 0.15 ± 0.05 0.03c 0 5.43 ± 3.16
FL8000b 8000 4.03 ± 1.92 1.22 ± 0.24 0 0 6.00 ± 0.61 0.71 ± 0.11 4.00 ± 1.19 1.61 ± 0.12 0.03c 0.00 0.06c 0 10.37 ± 0.88
FL9600 9600 2.23 0.36 0 0 1.03 0 1.40 0.19 0.00 0.00 0.00 0 1.65
FL10400 10,400 2.63 0.28 0 0 0.00 0 0.00 0.14 0.00 0.00 0.00 0 0.00
PA10400 10,400 2.26 0.00 0 0 0.24 0 0.64 0.30 0.00 0.00 0.00 0 0.00
FL10500 10,500 3.53 0.57 0 0 0.35 0.07 0.51 0.14 0.00 0.13 0.00 0 0.70
PA10500 10,500 3.58 0.28 0 0 0.12 0 0.42 0.34 0.00 0.12 0.00 0 0.42

FL free-living, PA particle-associated. Bacterial sequences were normalized to gene length. Estimated percentages were calculated using recA abundance. Data shown are means ± SD.

aMean of two replicates, which are from different cruises but the same station (September 2016 and March 2017).

bMean of two replicates, which are from the same cruise (March 2017).

cValues from one cruise when another value is zero.