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. 2020 Aug 12;17(5):213–224. doi: 10.1007/s11897-020-00469-9

Table 1.

Big data of types in heart failure. Many types of big data used in the study of HF are listed below along with a brief description. Data types specifically addressed in this review are in italics

Types of big data Description Examples in HF
Genomics
  Genome-wide association study (GWAS) Observational study testing the association of genome-wide common genetic variation with a trait in a population of individuals. Reviewed in [6, 7]
  Whole-genome sequencing (WGS) Sequencing of the whole genome. Usually applied in the study of inherited disorders resulting in HF. [8, 9]
  Whole-exome sequencing (WES) Sequencing of the exome (protein-coding portion) of the genome. Usually used to study forms of HF with known genetic etiologies. Reviewed in [6]
Transcriptomics
  Microarray Quantification of RNA by fluorescence measurement of cDNA using chips. Limited to genes targeted by array chip. [10, 11]
  Bulk RNAseq Quantification of RNA though sequencing of cDNA, alignment to reference genome, and counting. [12, 13]
  Single-cell RNAseq Single cell or nucleus isolation prior to RNAseq [14••]
  Spatial transcriptomics RNAseq performed on patches of tissue on slides [15]
Proteomics The study of proteins or peptides in a targeted or agnostic manner. Reviewed in [1618]
  Metabolomics The agnostic or targeted study of metabolites. Reviewed in [19]
  Lipidomics The study of the complete or targeted lipid profile in an individual or population [20, 21]
  Wearables An item worn externally that provides continuous data on parameters like heart rate, blood pressure, or fitness activity. Reviewed in [22]
Clinical data
  Electronic health records Electronic data representing patients or patient groups produced for the purpose of managing clinical care [23]
  Imaging data The process of creating visual representation of physiology. Examples include CT, MRI, echocardiography, EKG, X-ray. Reviewed in [24]