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. 2020 Feb 19;10(13):7523–7540. doi: 10.1039/c9ra10663d

Docking score and H-bond interactions of lead compound 3, ICA38 and synthesized compounds 8i, 13c, 13d and 18b in the MmpL3 binding pocket.

Compounds Docking score (kcal mol−1) No. of H-bonds Distance Amino acids Ligand atom
8i −14.05 2 2.48 Asp645 NH of amide
2.68 Asp645 NH of quinolone
13c −11.97 1 2.49 Asp645 NH of amide
13d −12.01 1 2.39 Asp645 NH of amide
18b −13.99 1 2.39 Asp645 NH of amide
3 −13.16 2 2.39 Asp645 NH of amide
2.75 Asp645 NH of indole
ICA38 −22.71 1 2.54 Asp645 NH of amide