Docking score and H-bond interactions of lead compound 3, ICA38 and synthesized compounds 8i, 13c, 13d and 18b in the MmpL3 binding pocket.
Compounds | Docking score (kcal mol−1) | No. of H-bonds | Distance | Amino acids | Ligand atom |
---|---|---|---|---|---|
8i | −14.05 | 2 | 2.48 | Asp645 | NH of amide |
2.68 | Asp645 | NH of quinolone | |||
13c | −11.97 | 1 | 2.49 | Asp645 | NH of amide |
13d | −12.01 | 1 | 2.39 | Asp645 | NH of amide |
18b | −13.99 | 1 | 2.39 | Asp645 | NH of amide |
3 | −13.16 | 2 | 2.39 | Asp645 | NH of amide |
2.75 | Asp645 | NH of indole | |||
ICA38 | −22.71 | 1 | 2.54 | Asp645 | NH of amide |