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. 2020 Apr;20(1):58–75. doi: 10.2174/1871524919666191014104843

Table 3.

Predicted SNPs and miRNAs analyzing using miRNA target prediction databases.

Gene dbSNP ID Variation miRNA |ΔΔG|
(kCal/mol) 		MirSNP TagetScan PolymiRTS miRNASNP miRdSNP Effect
ADRA2A rs11195419 C/A hsa-miR-3677-5p 6.85 + + + Create
hsa-miR-3926 2.2 + + + Create
hsa-miR-548s 0.43 + + + Create
rs3750625 C/A hsa-miR-1207-5p 0.05 + + + Create
hsa-miR-149-3p 1.56 + Enhance
hsa-miR-2682-5p 6.44 + + Break
hsa-miR-3150a-3p 0.02 + Enhance
hsa-miR-34a-5p 1.38 + + + Break
hsa-miR-34b-5p 1.5 + + + Break
hsa-miR-34c-5p 1.56 + + + + Break
hsa-miR-3616-3p 0.32 + Decrease
hsa-miR-4446-3p 2.99 + + + Create
hsa-miR-449a 0.0 + + + + Break
hsa-miR-449b-5p 3.29 + + + Break
hsa-miR-449c-5p 1.11 + + + Break
hsa-miR-4514 0.0 + Enhance
hsa-miR-4692 0.0 + Decrease
hsa-miR-4763-3p 0.98 + + Create
hsa-miR-512-3p 2.74 + + + Break
hsa-miR-940 0.44 + + + + Create
rs13306146 A/G hsa-miR-432-5p 0.37 + Decrease
hsa-miR-646 0.16 + + Break
ASTN2 rs7518 C/T hsa-miR-3189-3p 0.3 + + Break
hsa-miR-5001-3p 2.34 + Enhance
hsa-miR-5089 0.01 + Break
BDNF rs7124442 C/T, G hsa-miR-142-5p 0.65 + Decrease
hsa-miR-5590-3p 0.1 + Enhance
hsa-miR-922 0.77 + Break
CHRNA4 rs6090378 A/G hsa-miR-136-5p 0.36 + Break
rs6011770 C/T hsa-miR-3186-3p 0.23 + Enhance
hsa-miR-4267 0.04 + Break
hsa-miR-4661-5p 0.77 + Create
hsa-miR-629-3p 0.14 + Decrease
CNTF rs2515362 T/C hsa-miR-3174 0.33 + Enhance
hsa-miR-548ac 0.94 + Break
hsa-miR-548d-3p 0.35 + Break
hsa-miR-548h-3p 0.9 + Break
hsa-miR-548z 0.84 + Break
COMT rs165728 C/T, G hsa-miR-3138 0.4 + Create
hsa-miR-4520a-3p 1.59 + Create
hsa-miR-541-3p 1.52 + + Break
hsa-miR-654-5p 1.76 + + Break
CPLX2 rs3822674 T/C hsa-miR-4287 0.22 + Enhance
hsa-miR-4685-3p 0.22 + Enhance
hsa-miR-498 0.24 + Break
rs1006101 T/C hsa-miR-3689d 2.89 + + Create
hsa-miR-4802-5p 1.85 + + Create
hsa-miR-588 2.9 + Decrease
hsa-miR-609 2.9 + Break
rs4867809 A/G hsa-miR-4471 0.09 + + Create
hsa-miR-892b 0.1 + + + Create
rs1560034 T/C hsa-miR-4435 0.09 + Create
hsa-miR-548s 0.39 + Break
DBH rs129882 C/T hsa-miR-1268a 1.79 + + Break
hsa-miR-1268b 1.68 + + Break
hsa-miR-1285-3p 0.98 + + Create
hsa-miR-3187-5p 1.69 + Create
hsa-miR-4253 2.13 + Create
hsa-miR-4486 0.35 + + Break
hsa-miR-5189 0.03 + Create
hsa-miR-612 0.36 + + Create
rs1330630 G/A, C hsa-miR-1908 0.13 + Decrease
hsa-miR-3180 0.02 + Enhance
hsa-miR-3180-3p 0.07 + Enhance
hsa-miR-3196 2.77 + Enhance
hsa-miR-4697-5p 0.01 + + + Enhance
hsa-miR-4787-5p 0.34 + + Break
hsa-miR-609 0.01 + + Break
DIRAS2 rs7854469 T/A,C hsa-miR-3163 0.07 + + Decrease
hsa-miR-374a-5p 0.09 + + Create
hsa-miR-374b-5p 0.18 + + Create
rs16906711 C/G hsa-miR-139-5p 0.28 + + + Break
hsa-miR-633 0.4 + Create
rs726214 G/A hsa-miR-3117-3p 2.43 + Create
hsa-miR-3169 0.1 + Create
hsa-miR-3199 0.18 + + Break
hsa-miR-4648 2.29 + + Break
hsa-miR-4692 0.14 + Decrease
DRD1 rs686 G/A hsa-miR-4323 0.45 + Create
DRD2/ANNK1 rs6278 C/A hsa-miR-214-3p 1.58 + + + Break
hsa-miR-298 1.3 + + Create
hsa-miR-3154 2.16 + + Create
hsa-miR-3619-5p 1.82 + + + Break
hsa-miR-3714 4.48 + Decrease
hsa-miR-3918 0.92 + Enhance
hsa-miR-761 1.59 + + + Break
rs6279 G/C hsa-miR-4311 0.31 + + Break
hsa-miR-4323 1.31 + Enhance
hsa-miR-4758-3p 1.85 + Enhance
rs6276 C/T hsa-miR-1234 0.69 + + Create
hsa-miR-3064-5p 0.42 + Break
hsa-miR-3176 0.03 + + Break
hsa-miR-3922-3p 0.8 + + Break
hsa-miR-4316 0.68 + Decrease
hsa-miR-4710 0.08 + Decrease
hsa-miR-485-5p 5.2 + Enhance
hsa-miR-5580-5p 0.02 + + Break
DRD5 rs1967551 T/C hsa-miR-210 0.58 + Enhance
hsa-miR-4697-3p 0.41 + Create
hsa-miR-636 0.3 + Enhance
hsa-miR-654-3p 0.15 + Break
GDNF rs11111 T/C hsa-let-7f-2-3p 2.29 + + Create
hsa-miR-1185-1-3p 3.66 + + Create
hsa-miR-1185-2-3p 3.69 + + Create
hsa-miR-3934 0.75 + Enhance
rs3749692 A/G hsa-let-7a-2-3p 0.69 + + Break
hsa-let-7g-3p 0.65 + + Break
hsa-miR-1915-3p 0.45 + Enhance
hsa-miR-3649 2.81 + Create
hsa-miR-4700-3p 2.22 + Break
hsa-miR-5685 2.81 + Enhance
GRIN2A rs767749 T/G hsa-miR-3618 1.84 + Break
rs1420040 A/G hsa-miR-4645-5p 0.37 + Decrease
hsa-miR-580 0.15 + Create
rs9940680 G/C hsa-miR-181a-5p 2.91 + Decrease
hsa-miR-181b-5p 1.31 + Enhance
hsa-miR-181d 3.91 + Enhance
hsa-miR-3663-5p 4.64 + Break
rs9933624 T/A, C hsa-miR-22-5p 0.45 + Enhance
hsa-miR-607 0.71 + Create
rs8045712 C/T hsa-miR-1343 0.29 + Decrease
rs8044472 G/A, C hsa-miR-4637 0.09 + Decrease
hsa-miR-4653-3p 0.04 + Create
hsa-miR-520a-5p 0.14 + + Break
hsa-miR-525-5p 0.13 + + Break
rs1014531 G/A hsa-miR-1185-5p 1.44 + Enhance
hsa-miR-1266 1 + Create
hsa-miR-197-5p 1 + Create
hsa-miR-3132 0.99 + Create
hsa-miR-3664-3p 1.04 + Break
hsa-miR-3679-5p 1.02 + Enhance
hsa-miR-4518 1.87 + Create
hsa-miR-510 1 + Decrease
HTR2A rs3125 C/G, T hsa-miR-3662 0.08 + Decrease
hsa-miR-3976 2.92 + + Break
hsa-miR-5689 0.2 + + + Create
HTR2C rs1801412 T/G hsa-miR-10a-5p 0.4 + + Break
hsa-miR-10b-5p 2.66 + + Break
hsa-miR-141-3p 4.61 + + Create
hsa-miR-200a-3p 4.6 + + Create
hsa-miR-2054 0.86 + Decrease
hsa-miR-2115-3p 1.62 + Enhance
hsa-miR-339-5p 5.82 + + Break
MAOA rs3027407 A/G hsa-miR-3120-5p 2.49 + + Create
hsa-miR-4652-3p 0.22 + + + Break
MAOB rs3027439 A/G hsa-miR-3173-3p 0.1 + + Create
hsa-miR-3689d 0.2 + Create
hsa-miR-4668-5p 0.18 + Decrease
hsa-miR-4668-5p 0.18 + Enhance
hsa-miR-4668-5p 0.18 + Enhance
hsa-miR-583 0.03 + Break
rs2072745 A/T hsa-miR-4511 0.01 + Enhance
rs3027440 A/G hsa-miR-1226-5p 0.0 + Decrease
hsa-miR-3616-3p 0.02 + Break
hsa-miR-4744 0.04 + Enhance
rs17462 T/C hsa-miR-4299 0.47 + + Break
hsa-miR-4738-3p 0.84 + + + Break
hsa-miR-582-3p 0.7 + + Break
NOS1 rs12425729 T/C hsa-miR-548v 0.97 + Decrease
rs10774906 T/C hsa-miR-4752 1.47 + Create
hsa-miR-548v 1.46 + Enhance
rs10774907 G/A hsa-miR-3145-3p 0.81 + + Break
hsa-miR-452-5p 0.83 + Decrease
rs9658570 G/T hsa-miR-3120-5p 0.04 + Enhance
hsa-miR-632 0.05 + Decrease
rs9658562 A/T hsa-miR-302b-5p 1.56 + + Create
hsa-miR-302c-5p 0.35 + + Create
hsa-miR-302d-5p 0.29 + + Create
hsa-miR-3143 0.17 + + Create
hsa-miR-593-5p 0.06 + Enhance
rs2682826 G/A hsa-miR-140-5p 2.17 + Enhance
hsa-miR-29b-2-5p 0.6 + Decrease
hsa-miR-501-3p 2.03 + Decrease
hsa-miR-502-3p 2.07 + Decrease
SLC1A3 rs1049522 A/C hsa-miR-3171 0.0 + + + Break
hsa-miR-3668 0.0 + + Create
hsa-miR-576-3p 0.19 + + Create
SLC6A2 rs42879 T/C hsa-miR-30a-3p 2.73 + Enhance
hsa-miR-30d-3p 4.22 + Enhance
hsa-miR-4263 1.53 + Break
hsa-miR-4329 3.34 + Create
hsa-miR-4786-5p 0.49 + Create
hsa-miR-5693 2.68 + Enhance
rs36006 T/C hsa-miR-3692-3p 0.13 + Break
hsa-miR-4311 0.12 + Break
SLC6A3 rs7732456 A/C, T hsa-miR-3976 1.86 + Break
hsa-miR-4427 1.92 + Decrease
hsa-miR-5186 1.92 + Break
hsa-miR-5585-3p 1.51 + Enhance
rs1042098 A/G hsa-miR-187-3p 3.05 + Enhance
hsa-miR-2116-3p 0.44 + Enhance
hsa-miR-4713-5p 2.45 + Enhance
hsa-miR-5187-5p 2.28 + Break
SLC6A4 rs7224199 G/T hsa-miR-1252 0.03 + Break
hsa-miR-3185 0.09 + Break
rs3813034 A/C hsa-miR-2053 0.37 + Break
hsa-miR-569 0.42 + Break
hsa-miR-571 0.31 + Decrease
rs1042173 A/C hsa-miR-3163 0.71 + Enhance
hsa-miR-3942-5p 0.1 + Enhance
SLC9A9 rs3796229 A/G hsa-miR-15a-3p 0.62 + Decrease
hsa-miR-1972 0.34 + Enhance
rs3796228 T/C hsa-miR-1260a 5.37 + + Create
hsa-miR-1260b 0.38 + + Create
SLC18A2 rs10377 A/C hsa-miR-3145-3p 0.78 + Enhance
hsa-miR-3163 3.11 + Enhance
hsa-miR-3163 3.11 + Enhance
hsa-miR-3646 3.12 + + Create
hsa-miR-3662 3.28 + + + Create
rs14240 T/C, A hsa-miR-1297 1.98 + + Break
hsa-miR-26a-5p 2.26 + + + Break
hsa-miR-26b-5p 2.27 + + Break
hsa-miR-3671 1.87 + + + Create
hsa-miR-4465 1.48 + + Break
hsa-miR-5002-5p 2.32 + Decrease
hsa-miR-607 1.8 + + + Create
rs363282 G/A hsa-miR-2278 2.64 + Decrease
rs363235 T/A, C hsa-miR-1205 0.97 + Enhance
hsa-miR-125b-2-3p 3.2 + + + Create
hsa-miR-1297 0.83 + + Break
hsa-miR-26a-5p 1 + + + Break
hsa-miR-26b-5p 0.82 + + + Break
hsa-miR-4320 2.51 + Break
hsa-miR-4418 1.35 + Enhance
hsa-miR-4465 0.7 + + Break
hsa-miR-509-3-5p 0.41 + Enhance
hsa-miR-509-5p 0.78 + Enhance
hsa-miR-513b 1.4 + Create
hsa-miR-513c-5p 3.87 + + + Break
hsa-miR-514b-5p 4.36 + + + Break
rs363238 C/A hsa-miR-297 0.77 + Decrease
hsa-miR-3149 0.98 + + Break
hsa-miR-4677-5p 0.53 + + Decrease
hsa-miR-4774-5p 6.41 + + Create
hsa-miR-578 0.98 + + + Break
hsa-miR-643 0.98 + + Break
SNAP25 rs3746544 G/T hsa-miR-3617 0.56 + Break
hsa-miR-3913-3p 0.14 + Break
hsa-miR-641 0.38 + Break
rs1051312 T/C hsa-miR-3646 0.31 + Decrease
hsa-miR-3664-3p 0.24 + + Break
hsa-miR-510 1.86 + + Break
rs8636 T/A, C hsa-miR-103b 3.34 + + + Create
hsa-miR-424-3p 1.78 + + + Break
hsa-miR-515-5p 0.22 + Enhance
hsa-miR-519e-5p 0.66 + Decrease
SPOCK3 rs6846930 C/G, A hsa-miR-495 0.32 + Break
hsa-miR-5688 0.33 + Break
rs3762245 A/G hsa-miR-4260 0.05 + Decrease
hsa-miR-499b-5p 2.59 + + Break
STX1A rs1569061 C/T hsa-miR-3173-5p 4.34 + Enhance
hsa-miR-661 0.0 + Enhance
SYP rs7889267 G/A hsa-miR-1266 0.11 + Decrease
hsa-miR-1321 0.14 + Create
hsa-miR-149-3p 0.0 + + Create
hsa-miR-3173-3p 0.18 + + Break
hsa-miR-4270 0.16 + Create
hsa-miR-4441 0.06 + Create
hsa-miR-4518 0.1 + Decrease
hsa-miR-4728-5p 0.02 + Create
hsa-miR-4739 2.12 + Create
hsa-miR-4756-5p 0.18 + Create
hsa-miR-4779 0.0 + Break
SYT1 rs1245667 T/C hsa-miR-143-5p 1.25 + + + + Create
hsa-miR-148a-3p 1.17 + + + + Create
hsa-miR-148b-3p 0.83 + + + + Create
hsa-miR-152 1.35 + + + Create
hsa-miR-3189-3p 1.85 + Decrease
hsa-miR-34c-5p 1.46 + + Enhance
hsa-miR-449a 1.47 + + Enhance
hsa-miR-449b-5p 1.47 + Enhance
hsa-miR-4650-3p 1.78 + + Break
hsa-miR-635 0.72 + Enhance
hsa-miR-936 1.3 + + + Create
rs2248102 G/A hsa-miR-4327 3.67 + + Break
VAMP2 rs1150 A/G hsa-miR-5583-3p 0.0 + Enhance
hsa-miR-601 0.0 + Create
rs1061032 T/A, C, G hsa-miR-127-3p 0.02 + Decrease
hsa-miR-149-3p 2.7 + Create
hsa-miR-4447 2.56 + + Break
hsa-miR-4472 2.12 + + Break
hsa-miR-4481 1.76 + + Break
hsa-miR-4728-5p 2.47 + Create
hsa-miR-4745-5p 3.53 + + Break