Table 3.
Mammalian hcoErosions that either have an RVIS (Residual Variation Intolerance Score) in the bottom quintile of all human genes analyzed and/or have a pLI (probability of being loss-of-function intolerant) score ≥ 0.9 (✓)
| Gene | RVIS percentile | gnomAD pLI score ≥ 0.9 | Species with hcoErosion |
|---|---|---|---|
| UBC | 4.19% | (I) Hedgehog, Star-nosed mole, Shrew | |
| (II)Naked mole-rat, Guinea Pig, Chinchilla, Brush-tailed rat | |||
| (III)Ferret, Panda, Pacific walrus, Weddell seal | |||
| (IV)Alpaca, Bactrian camel | |||
| DDX60 | 6.02% | Tibetan antelope, Sheep, Domestic goat, Cow | |
| PCDHA7 | 10.27% | Panda, Weddell seal, Ferret, Pacific walrus | |
| ADAM30 | 10.78% | N/A | Guinea Pig, Brush-tailed rat, Naked mole-rat, Chinchilla |
| ZYG11B | 14.34% | ✓ | Rhesus macaque, Crab-eating macaque |
| PPP2R2D | 18.43% | ✓ | Tibetan antelope, Sheep, Domestic goat, Cow |
| DCAF12L1 | 22.73% | ✓ | Naked mole-rat, Guinea Pig, Chinchilla, Brush-tailed rat |
(I), (II), (III), (IV ) Independent hcoErosion loss events:
(I) species belonging to group I (II) species belonging to group II (III) species belonging to group III (IV) species belonging to group IV.