Table 3.
Top five Gene Ontology Biological Process gene sets (from MSigDB C5.BP collection) found to have higher pathway activity scores in cluster 4 relative to other cells in the mouse brain data set according to a Wilcoxon rank sum test. Gene sets are ordered according to P-value from Wilcoxon test
| VAM |
| GLIAL-CELL-DIFFERENTIATION |
| LEPTIN-MEDIATED-SIGNALING-PATHWAY |
| CHOLESTEROL-CATABOLIC-PROCESS |
| ASTROCYTE-DIFFERENTIATION |
| GLIAL-CELL-DEVELOPMENT |
| GSVA |
| POSITIVE-REGULATION-OF-EXTRACELLULAR-MATRIX... |
| POSITIVE-REGULATION-OF-POSTSYNAPTIC-MEMBRA... |
| GLIAL-CELL-FATE-COMMITMENT |
| CHOLESTEROL-CATABOLIC-PROCESS |
| NOTOCHORD-DEVELOPMENT |
| ssGSEA |
| STRESS-RESPONSE-TO-METAL-ION |
| POSITIVE-REGULATION-OF-EXTRACELLULAR-MATRIX... |
| CHOLESTEROL-CATABOLIC-PROCESS |
| GLIAL-CELL-FATE-COMMITMENT |
| REGULATION-OF-EXTRACELLULAR-MATRIX-ASSEMBLY |
| z-scoring |
| REGULATION-OF-EXTRACELLULAR-MATRIX-ASSEMBLY |
| REGULATION-OF-GROWTH-RATE |
| ADENOHYPOPHYSIS-DEVELOPMENT |
| PROSTATE-GLAND-MORPHOGENESIS |
| STRESS-RESPONSE-TO-METAL-ION |
| PCA |
| CELLULAR-RESPONSE-TO-COPPER-ION |
| RESPONSE-TO-ZINC-ION |
| CELLULAR-RESPONSE-TO-CADMIUM-ION |
| PROSTATE-GLAND-MORPHOGENESIS |
| RESPONSE-TO-COPPER-ION |